Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 330 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 47/339 (13%)

Query: 48  LVVWIVAAMLAALLAWAWF-FKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDI 106
           L++ ++  +LAA+L   W+ ++  +  T T       R   +    GG L  L V EGD 
Sbjct: 5   LIIVVLLLLLAAVLGGGWWWYQSSQQKTLTLYGNVDIRTVNLSFRVGGRLASLSVDEGDA 64

Query: 107 VSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNGTPLVFPDEVRGEPGLVRT 166
           + AGQ L +LDR   E+ +Q++ + V  A A    + A                      
Sbjct: 65  IKAGQTLGELDRAPYENALQQAQANVSTARAQYDLMMAGY-------------------- 104

Query: 167 ETALYQSRREQLASSLAGVNQALV-------LMRRELALTEPLVSRGAASDVEVLRLKRQ 219
                  R E++A + A VNQA           +R+L L +   S  +A+D+E  R  R 
Sbjct: 105 -------RSEEIAQAAAAVNQAQAAYDYAQNFYQRQLGLRKS--SAISANDLENARSSRD 155

Query: 220 INEAETKAA-DLRSQYYVKAR-EDLAKANAEIE-AQRSVTRGRSDSLTRLTFASPVRGIV 276
             +A  K+A D   QY    R +++A+A A +E AQ ++ + + D L   T  SP  G +
Sbjct: 156 QAQATLKSAQDKLRQYRAGNRPQEIAQAKASLEQAQAALAQAKLD-LHDTTLTSPSDGTL 214

Query: 277 KDIVVTTVGGVLPPGGKLMEIVPLDEKLLVEARISPRDVAFIHPGQDATVKVTAYDYAIY 336
               V   G +L  GG +M +  L   + V A I  +++    PG++  +   +     Y
Sbjct: 215 MTRAVEP-GSMLSAGGTVMTL-SLTHPVWVRAYIDEKNLGQAQPGREVLLYTDSRPDKPY 272

Query: 337 GGLPGKVT---TISPDTIQ-DDVKRDVYYYRVYIRTDAD 371
            G  G V+     +P T++  D++ D+ Y    + TDAD
Sbjct: 273 RGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDAD 311