Pairwise Alignments

Query, 884 a.a., putative membrane protein from Variovorax sp. SCN45

Subject, 706 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 121/621 (19%), Positives = 238/621 (38%), Gaps = 70/621 (11%)

Query: 110 GFLVLLGMLGTFLGMVVTLNGTGLALDSATDLQAVRSSLSAPVKGLGLAFGTSVAGVAAS 169
           GFL  LG++GTF+G+ + L+   +A     D+  +++ ++  + G  +AF TSV GV  S
Sbjct: 144 GFLTALGVIGTFVGLQLGLSDLNIA--GNVDVNEMKNGVAGVINGAKIAFMTSVWGVLLS 201

Query: 170 AMLGLMSALCRRERLQAGQLLDSRIATTLRVFSQVHQREESFKLLQQQALAMPELVGQL- 228
                +  +  +   +  + L +RI       S  +Q +      QQ   ++  L  ++ 
Sbjct: 202 VAFNFIEKILEQIIRKKIKSLQNRIDRMFPRLSAEYQLQSIANNSQQSRESLQGLAEKIG 261

Query: 229 QAMMAALAQQSQAQNDRLISSQDSFHGKAEAVYAGLATSVDQSLRQSLTESARIAGAAIQ 288
           + M  +L Q +Q     L SS +            +A ++++ + ++   + +   + +Q
Sbjct: 262 EKMQESLIQATQGIQQGLESSLEKI----------MAPAINKLVDETSDGNQKALESVLQ 311

Query: 289 PVVEATMAAIARETAALHGTLSQTVQQQLEGLSSRFAATTAGVADTWQTALAEHRQTSEA 348
             +E       ++  A+  + SQ V + LE +S   AA    +      +    ++    
Sbjct: 312 SFMEGFGQQGEQQRVAM-DSASQNVNKTLESMSVSMAAFVNKLEVQQNASSEREKELIST 370

Query: 349 LSGEVRGSHDRFAETFAQRSAALVDNVAAQLERTVGSVSNTWNGALAEHQRVSEKLSADS 408
           +S +V            ++   L + V  Q+              L E     E  +++ 
Sbjct: 371 ISVQV----SELVTQGNEQKRVLTEFVEKQVSE------------LGEQLTKRELAASER 414

Query: 409 QQALTAAAATFEQHSASLLRTVGEAHAELQTDIASRDEQRLAVWTQSLAAMAAGLKDEWQ 468
           +Q L   A++ E     L+  V  A +++ TD       +L         MA+ ++ E  
Sbjct: 415 EQKL---ASSMESTIKDLVENV-SAQSQVLTDFVQNQVVQLTQTFSERDGMASQMEKE-- 468

Query: 469 QAGAYAAGQQQHLLDTISQVSTRDEQKLAAWTQSLAAMAAALREEWKQAGTYAAGQQQHL 528
                            + +     Q + A T  L A   A  E  +        Q + L
Sbjct: 469 ----------------RNDIFVNQTQAMKAGTDELLAQVKAATESQQITTNSIIEQGKQL 512

Query: 529 LDTI-SQVSSRDEQKLAAWTQSLADMAAALREEWQQAGVHATGQQQLLLDAISQISSRDE 587
            ++I S VS+      A  T+S+   A  LR       V  +     + DA +++S    
Sbjct: 513 QNSIDSSVSAS-----ARATESMQQSANELRVAADSMNVFGSN----IKDAGNKLSGAVT 563

Query: 588 QRLSAWTGSLAS---MAAALKEEWQQAGAHTTGQQQQLLDAISQISSRDEQRLSAWTGSL 644
           + +++ T  LA    + A   +  ++     T +   + D I+ +    EQ  S    + 
Sbjct: 564 EAVNS-TKDLAEQNHLGAVKVQALREQLLEDTSKFSAIADQINNMLISAEQSFSTLRTTQ 622

Query: 645 ATMADTLKDEWQQAGAQSASQQHQLLEQVAQTAREMSSQADA----HAKATVAEIAQLLQ 700
                  K    +  ++      +L EQ+AQ   + + QA+     H K       Q  +
Sbjct: 623 NEFLAEQKGNLNELTSEMKRNVKELTEQMAQLLEDYAEQANGQTAEHLKVWANSSTQYAE 682

Query: 701 AASEAPRAAAEVVAELRQKLS 721
           + + A RA + VV E++ K+S
Sbjct: 683 SMNTAVRAISSVVDEIQDKVS 703



 Score = 39.3 bits (90), Expect = 8e-07
 Identities = 56/308 (18%), Positives = 119/308 (38%), Gaps = 22/308 (7%)

Query: 579 ISQISSRDEQRLSAWTGSLASMAAALKEEWQQAGAHTTGQQQQLLDAISQISSRDEQRLS 638
           +  I++  +Q   +  G    +   ++E   QA   T G QQ L  ++ +I +    +L 
Sbjct: 239 LQSIANNSQQSRESLQGLAEKIGEKMQESLIQA---TQGIQQGLESSLEKIMAPAINKLV 295

Query: 639 AWTGSLATMA-DTLKDEWQQAGAQSASQQHQLLEQVAQTAREMSSQADAHAKATVAEIAQ 697
             T      A +++   + +   Q   QQ   ++  +Q   +          A V ++  
Sbjct: 296 DETSDGNQKALESVLQSFMEGFGQQGEQQRVAMDSASQNVNKTLESMSVSMAAFVNKLEV 355

Query: 698 LLQAASEAPRAAAEVVAELRQKLSDSMARDNAMLEERSRILETLSTLLDAVNHASIEQRA 757
              A+SE  +   E+++ +  ++S+ + + N   E++  + E +   +  +     ++  
Sbjct: 356 QQNASSEREK---ELISTISVQVSELVTQGN---EQKRVLTEFVEKQVSELGEQLTKREL 409

Query: 758 AVDSLVAASAEVLERVGGRFTEQVEAETGKMTGIAAQITGGAAEVASMGEAFGLAVQMFS 817
           A        A  +E       E V A++  +T           +  S  E  G+A QM  
Sbjct: 410 AASEREQKLASSMESTIKDLVENVSAQSQVLTDFVQNQVVQLTQTFS--ERDGMASQMEK 467

Query: 818 QSNDKMGAQLQRIEAALGKSIAR----------SDEQLAYYVAQAREVIDLSIMSQKQIV 867
           + ND    Q Q ++A   + +A+          +   +     Q +  ID S+ +  +  
Sbjct: 468 ERNDIFVNQTQAMKAGTDELLAQVKAATESQQITTNSIIEQGKQLQNSIDSSVSASARAT 527

Query: 868 EDLQQLAS 875
           E +QQ A+
Sbjct: 528 ESMQQSAN 535