Pairwise Alignments

Query, 422 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 392 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.7 bits (156), Expect = 5e-15
 Identities = 93/352 (26%), Positives = 137/352 (38%), Gaps = 54/352 (15%)

Query: 38  GKPATGEPIPIGAVVGKTGPDDFSASGQA---AAAYFKCVNANGGINGRPIDYIVVDDQW 94
           G  A+ +PI IG     TG    S  G A   A      +NA GG+NG P++ +V D + 
Sbjct: 24  GPAASADPIKIGGAFNLTG-GQASLDGPAKNGAQLAIDTLNAAGGVNGTPLELVVYDGKT 82

Query: 95  NPETAAQVASKLVKDRKVVALAG---STSFVECGANAKMYADEGVMVIA-GTGVPR---- 146
           +P   A + S+L+   KV A+ G   S   +  G NA+     GV  IA G   P+    
Sbjct: 83  DPAVVASLGSQLINSDKVSAIIGFSDSDPVLALGPNAQ---KAGVPFIAVGATSPKLPDQ 139

Query: 147 -------ECFNARNYVPVNAGPRVSATIAAMYAAQKYKAKKMVCIIPNIPSLGNWACEGP 199
                   CF          G    A + A +A    KAK +  +            +  
Sbjct: 140 IGDTMFLACF----------GDNTQAAVGASFAIDDLKAKSVYVLEDTANEYATLLSKYF 189

Query: 200 KEWGRKNGVEV---ETIAIDPGSADATSTMLQAAAKKPDTI-IMNVPKGILVPMLAAAEQ 255
           +E     G +V   +T      S  A  T ++AAA+KPD + I   P  I    L   + 
Sbjct: 190 RETFEHLGGKVIGRDTYRTGDKSFTAQITKIKAAAEKPDILYIAATPDSI---GLVVRQV 246

Query: 256 QNIGKKIHFVSAAPAYNTDVPKAIGPYWKGN-FDVNLEFNPLESAGPDNKNWLAVMDKYG 314
           +  G K+  V     Y+T +   +G     N +     F    + GP    + A    YG
Sbjct: 247 RQAGLKLPIV-GGDGYDTPLLLEVGGASANNVYFTTHSFVSDSAPGPMKTFFDAYGKAYG 305

Query: 315 AKSDPRDTFSQGGYVAARIVTQALLKM---DPKKI--------DRAGVTDAL 355
             + P + F+  GY    +V  A+ +    DP  I        D AGVT A+
Sbjct: 306 --NAPENAFAALGYDTVMLVADAIKRAGSGDPAAIRKALTETKDLAGVTGAV 355