Pairwise Alignments

Query, 289 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 97.8 bits (242), Expect = 5e-25
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 13/252 (5%)

Query: 11  GLGLGAVYALSGVGLVVLYRSSGVLNFAFGAIGAIGAYVAW---SMLEADWPQALAWSAA 67
           GL LG+V  L+ +GL + +   G++N A G +  +GAY  +    ++   +P    WS A
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 68  IVTSM--LLSLAYGRLLAP---RLSHRDPTIRSIATLGFALVVVGFTEWYWGEQPRRLVL 122
           I   +  L++ A G  L     R  +  P    +AT G +L++       +G   R +  
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRPLETLLATWGISLILQQTVRTIFGPTNREVGN 367

Query: 123 PT-DAGAIDFVLGEVEVRLTHTRALGLTLAVLMMGGVGLLLSKTRVGLKMRALANDRDLS 181
           P+  +GA  F LG + +  T  R   +  A+ +   +  LL KT +GL+MRA+  +R ++
Sbjct: 368 PSWMSGA--FELGGLAI--TWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMA 423

Query: 182 ALLGIRVLGVDTVAWVLSGAFAGVCGLLLANIVRLQATLLTFLVIPAFAAAIIGRLHSLP 241
           + +GIR   VD + + L    AG+ G+ L+ I  +   L    +I +F   + G + +L 
Sbjct: 424 SSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLW 483

Query: 242 ATVAGGIAIGVL 253
            T+ G  ++G+L
Sbjct: 484 GTLVGAFSLGIL 495