Pairwise Alignments

Query, 289 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 302 a.a., high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 93.2 bits (230), Expect = 6e-24
 Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 35/302 (11%)

Query: 4   YLPFVISGLGLGAVYALSGVGLVVLYRSSGVLNFAFGAIGAIGAYVAWSMLEA----DWP 59
           +   +  GL  G++YAL  +G  ++Y    ++NFA G +  IGA+ A  +        +P
Sbjct: 6   FCELLFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMIGAFTALIVAGVLGIYGFP 65

Query: 60  QALAWSAAIVTSMLLSLAYGRLL----------APRLSHRDPTIRSIATLGFA--LVVVG 107
           +A     A + +++   AYG  L          APRLS   P I +I    F    V++ 
Sbjct: 66  EAGILIIAAIVAVIYCAAYGFTLEKVAYKPLRDAPRLS---PLISAIGMSIFLQNYVILA 122

Query: 108 FTEWYWGEQPRRLVLPTDAGAIDFVLGEVEVRLTHTR-ALGLTLAVLMMGGVGLLLSKTR 166
            T  +         +P      D  + E    +T T   L +  + + M G+ L +  TR
Sbjct: 123 QTSDF---------VPFPRLVPDLAILEPIAHITGTSDVLIIVTSAITMVGLTLFIKYTR 173

Query: 167 VGLKMRALANDRDLSALLGIRVLGVDTVAWVLSGAFAGVCGLLLANIVRLQATLLTFLV- 225
           +G  MRA A +R ++ LLGI    V ++ +++  + A + G+L+A+ +      + F+  
Sbjct: 174 MGKAMRATAQNRKMAMLLGIDADRVISLTFIIGSSLAAIGGVLIASHIGQVNFAIGFIAG 233

Query: 226 IPAFAAAIIGRLHSLPATVAGGIAIGVLEALAITVPGFAS--FRTATPFLIALAMIVFYR 283
           I AF AA++G + S+P  +AGG+ +G+ E+ A    G+ S  +  A  F + + +++F  
Sbjct: 234 IKAFTAAVLGGIGSIPGAMAGGLVLGLCESFA---TGYVSSDYEDALAFALLVLILIFRP 290

Query: 284 TG 285
           +G
Sbjct: 291 SG 292