Pairwise Alignments

Query, 457 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (255), Expect = 2e-26
 Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 23/225 (10%)

Query: 1   MNLRTKIVALAVAPLLIALVLVALAVRHQEHDLAQRERA----LIERSYMAQRRGELRSY 56
           +++R ++  L V  L++  +  A+ V+   HDL   ++     L+E +Y       L  Y
Sbjct: 19  LSIRNRLFLLTVVILVLLAIPFAIMVKDYRHDLMLEKQVQTQHLVESAYTL-----LEHY 73

Query: 57  VDLAVSNLLPLYESGKDDEATRNEALRRLAALNYGDDGYFFVYDLEGNSLMHSRQPELVG 116
              A    L         E  +N A + +A L YG + YF++ D +   +MH  +P+L G
Sbjct: 74  AQQATQGTLTT-------EQAQNTAKQAIAQLRYGANDYFWINDAQPAMVMHPMKPDLNG 126

Query: 117 QNLWGMRDSHGRYTIQELIKGAKEKGGAYVEYEWRKPSSAQLAPKLGYVTAMPRWNWMVG 176
           ++L   +D +G+    E++   +      VEY+W KP + Q   K+ YV     W W++G
Sbjct: 127 KDLRSFKDPNGKALFVEMVNVTQRNQQGVVEYQWPKPGAEQPVDKVSYVKLFKPWGWIIG 186

Query: 177 TGLYLDDIQSTMDTLDRQMNANVTATLLWIAGIAALCLGVVSAAG 221
           TG+Y+DD+ +        +   +++ L+W+ G   + + + S  G
Sbjct: 187 TGIYVDDVNAL-------VMQRLSSILVWVVGTLLVLIVLASLIG 224