Pairwise Alignments

Query, 1172 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 1170 a.a., DNA polymerase III subunit alpha from Phaeobacter inhibens DSM 17395

 Score =  783 bits (2023), Expect = 0.0
 Identities = 468/1095 (42%), Positives = 633/1095 (57%), Gaps = 76/1095 (6%)

Query: 2    FVHLRLHTEFSVVDGTNRIDEAIKAAAADKQPALAITDLNNLFGAVKFYKQGRGKGVKPV 61
            F+HLR HTE+S+++G  R+ +        + PA+A+TD NNLF A++F     G GV+P+
Sbjct: 7    FIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDSNNLFAALEFSVAASGAGVQPI 66

Query: 62   IGAEIFIDGLGKEPGALTR----IVLLVQSMEGYLNLSELLARAWTQNVARGQSQAACKL 117
            +G ++ +      PG   +    +VLL QS  GY +L +L +  + +    G   A   L
Sbjct: 67   MGCQVDLRFTEPTPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYMRE---GSELAHVTL 123

Query: 118  EWVQELSGGLIALSGAQAGPLGQPLLQGQGERAAELALQLAGIFPHRFYIELQRA----G 173
            E +   S  +I LSG   GP+G+ L  GQ   A  L  +L  +FP R Y+ELQR     G
Sbjct: 124  EELAAHSEDVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKAMFPDRLYVELQRHPGEHG 183

Query: 174  RPEDEPHVIAA-VQLAARLKLPVVATHPVQFAAREDYEAHEARVCISEGEILGNPRRVRR 232
            +PE E       V++A  + LP+VAT+ V F   E YEAH+A +CI+EG  +      RR
Sbjct: 184  QPEAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEPRRR 243

Query: 233  FTEEQYFKSTAEMQALFADVPSALANTVEIAKRCNLTLVLGKPQLPDFPTPFISEGVRMP 292
             T + YFKS  EM ALFAD+P A+ NTVEIAKRC        P LP F    ++E     
Sbjct: 244  LTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAE----- 298

Query: 293  IDDFFRQESFEGLEMRLRHLYPDEAKREAQRARYVERLEFEINTILNMGFPGYFLIVGDF 352
                 R+ + EGL+ RL  + P     E     Y ERL+FE+  I  MGFPGYFLIV DF
Sbjct: 299  ----LRRIANEGLQQRLA-VIPHAVSVED----YQERLDFELGIIEGMGFPGYFLIVADF 349

Query: 353  IKWAKENGCPVGPGRGSGAGSLVAYALKITDLDPLEYKLLFERFLNPERVSMPDFDIDFC 412
            I+WAK++  PVGPGRGSGAGSLVAYAL ITDLDPL Y LLFERFLNPERVSMPDFDIDFC
Sbjct: 350  IQWAKDHDIPVGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFC 409

Query: 413  QGNRDRVIDYVKDKYGRNAVSQIATFGTMAARAAIRDVGRVLDMSYMFCDGISKLIPNKP 472
               R+ VI YV++KYGR+ V QI TFG + ++AA+RD+GRVL M Y   D +SKLIP   
Sbjct: 410  MDRREEVIKYVQEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIP--- 466

Query: 473  GMSVTLQYPPEKKIEGDKNNYAIEM---EPQLAERIEKEEEVRMLVELAQKLEGMTRNIG 529
                         +EG K    ++    EP+L E  E EE V  L++   ++EG+ R+ G
Sbjct: 467  -------------VEGVKPMSIVDSLREEPRLREEAENEEVVDRLLKYGMQVEGLLRSAG 513

Query: 530  MHAGGVLIAPGKLTDFCPLYQQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAR 589
             HA GV+I    L    PLY+ P S+   +Q++   VE  GLVKFDFLGL TLT+++ A 
Sbjct: 514  THAAGVVIGDRPLDALVPLYRDPRSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAM 573

Query: 590  EFIMKRHK----------------GQENFAFENIPLNDAATYRLFSEGTTEAVFQFESRG 633
            + I +  +                G EN     IPL+D  TY L+S   T AVFQ ES G
Sbjct: 574  DLIFQSGRDLHVAADGTQLYDPPEGAEN-QINAIPLDDTVTYDLYSRAKTVAVFQVESTG 632

Query: 634  MQGMLKDARPTRLEDLIALNALYRPGPMDLIPSFVARKHGREEVEYPHPAVAEMLSETYG 693
            M   LK  +PT +ED++AL ALYRPGPM+ IP +   K+G  +++  HP +  +L ET G
Sbjct: 633  MMDALKRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGLRKIQSVHPLIDHILEETQG 692

Query: 694  IMVYQEQVMQTAQILGGYSLGGADLLRRAMGKKKLEEMAEHREKFRAGALATHGIVQDKA 753
            I+VYQEQVMQ AQ++  Y+LGGADLLRRAMGKK  E M   R KF  GA A +G+   KA
Sbjct: 693  IIVYQEQVMQIAQVMANYTLGGADLLRRAMGKKIKEAMDAERPKFEKGA-AENGVPAKKA 751

Query: 754  DEIFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHYTAEFFCANMTVEMDDTDKLKLLF 813
             E+FDL+EKFA YGFNKSHAAAY++++Y TGWLK ++  EF    M  ++  TDKL + F
Sbjct: 752  SEVFDLLEKFANYGFNKSHAAAYAVVSYQTGWLKANHPVEFMAGVMNCDIHLTDKLAIYF 811

Query: 814  EDAQKNFGITFEPPDVNRGNYRFEPVTDRVIRYGLGAVKGTGQLAVEAVVRAREEGG--- 870
            E+ +K   + + PP VNR    F  V   ++ Y LGA+K  G  A+  V  AR E G   
Sbjct: 812  EEVKKGLSLPYVPPCVNRSEATFNVVKGELV-YALGALKNVGVEAMRLVTAARRESGEDK 870

Query: 871  PFKSLFDFCVRIDRQRINKRTVEALIKAGAFDAIQQNRASLIASVDRAFEF--AIATAAN 928
            PF +LFDF  R+D +++ KR +E L +AG FD +  NR  +  S+    ++  A+    N
Sbjct: 871  PFATLFDFARRVDLKKVGKRPLEMLARAGGFDQLDPNRRRVFDSLGALVDYSSAVHDQRN 930

Query: 929  ASQVDIFGDCEHGSATAEPDLVDATPWGVKERLTLEKTAVGFYLSGHLFDEVSHEVRRFC 988
            +SQV +FG  E G    EP L     W   ERL+ E  A+GFYLSGH  D+    ++R  
Sbjct: 931  SSQVSLFG--EAGEDLPEPRLPGTPDWLPAERLSEEFKAIGFYLSGHPLDDYMPALKRKD 988

Query: 989  KREIGDLLDSRDQ----QVIAGIVSDFRVINGQRG-RLAIFKLDDKSDAIDATADEALIN 1043
               + ++    ++      +AG+V+  +     RG R A  +L D S   + T    ++ 
Sbjct: 989  VMTLDEVTAKAERGPFMAKMAGVVAGRQERKSARGNRFAFAQLSDTSGGYEVTLFSEVLE 1048

Query: 1044 ANRNTLKDDELVIVS 1058
             +R  L+    V+++
Sbjct: 1049 KSREFLETGAKVVIT 1063