Pairwise Alignments

Query, 845 a.a., Flagellar biosynthesis protein FlhF from Variovorax sp. SCN45

Subject, 495 a.a., flagellar biosynthesis protein FlhF from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (513), Expect = 5e-56
 Identities = 112/298 (37%), Positives = 184/298 (61%), Gaps = 8/298 (2%)

Query: 111 RPVPLHQPVAAPAPVPHGDTVLNELHSMRGMIEEQLASVVWNDKQRRDPVRGRLLRTLLG 170
           R VP  +P+ A + +   +++  E+ S+R ++E Q++ ++W + +RR+P+R  L++ L  
Sbjct: 180 RKVP-EEPMVAVSEL---ESMREEMTSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLER 235

Query: 171 AGFSARLSKAMLEKLPTGQTYAEGMAYVRAELIRAVPVHEDEDALFAQGGVYALMGPTGV 230
            G S  ++  +   +P      +    +   +   +PV + +  +  +GGV AL+GPTGV
Sbjct: 236 MGVSLEMADQLACYIPEETPPPKAWKALLGLVSDQIPVVKHD--ILKRGGVVALLGPTGV 293

Query: 231 GKTTTTAKLAARCVMRFGADKLALVTTDSYRIGAYEQLRIYGQILNVPVYAVKDAADLHL 290
           GKTTT AKLAAR  M +G+D +ALVTTD+YRIGA+EQL IYG+I+  PV   KD+ +L  
Sbjct: 294 GKTTTVAKLAARAAMEYGSDNVALVTTDTYRIGAHEQLSIYGRIMGCPVRVAKDSNELAD 353

Query: 291 VLQDLRDKHMVLIDTVGMSQRDRAVPEQI-AMLGQSPRPVKRLLLLNATSHGDTLNEVVH 349
           V+  LR++ ++L+DT GM QRD  + EQ+  ++ +S   +   L+L AT+    L E + 
Sbjct: 354 VIYQLRNRRLILVDTAGMGQRDVRLSEQLDTLMQESGETIHSYLVLPATAQRKVLQETIE 413

Query: 350 AYRHGNDLTGCIFTKVDESTHPGALIDTVIRHRLPVHYISSGQKVPENLMQADRAQLV 407
            +R    L+GCI TK+DE    G  +  V+++ LPV YI++GQ+VPE+++ A    +V
Sbjct: 414 HFRR-IPLSGCIMTKLDECLSLGEFVSVVVQNALPVAYIANGQRVPEDIVIAQPKYMV 470



 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 14/64 (21%)

Query: 13 RKFVAATSREALRMVREALGADAIVLTHRATAEGVEIVAMVEGDVQGVARNAAPVTAAVA 72
          ++F A   + AL  V+E LG DA++++++  A GVEIVA V+GD               A
Sbjct: 4  KRFFAKDMKTALLQVKEELGVDAVIMSNKKVAGGVEIVAAVDGD--------------TA 49

Query: 73 PAPA 76
          PAPA
Sbjct: 50 PAPA 53