Pairwise Alignments

Query, 845 a.a., Flagellar biosynthesis protein FlhF from Variovorax sp. SCN45

Subject, 458 a.a., flagellar biosynthesis regulator FlhF (RefSeq) from Shewanella sp. ANA-3

 Score =  213 bits (541), Expect = 3e-59
 Identities = 150/438 (34%), Positives = 225/438 (51%), Gaps = 53/438 (12%)

Query: 13  RKFVAATSREALRMVREALGADAIVLTHRATAEGVEIVAMVEGDV-QGVARNAAPVTAAV 71
           ++F A   R AL  V++ LG+DA++++++    G+EIVA V+ D  +  A   AP    V
Sbjct: 4   KRFFAKDMRAALAQVKDTLGSDAVIMSNKKVNGGIEIVAAVDYDEPKAKAPATAPTFMDV 63

Query: 72  AP------APAPVPAPAPAPAPAPAPVIA-----------------------PAAAPVAQ 102
           +       A AP+ A       APA  +                        PA A   Q
Sbjct: 64  SDDLVSLGAKAPIRAETKLKPSAPADSLQALLEKQQSRLNQQLTHQQQDAELPAWAQGLQ 123

Query: 103 VAPAAPVPRPVPLHQ-----PVAAPAPVPHGDTVLNELHSMRGMIEEQLASVVWNDKQRR 157
            APA P      + Q     P  +       + + +EL S+R ++  Q+++++   K+R 
Sbjct: 124 -APAVPKAERRDMGQTFDKKPQVSQKQNADIEAMRDELASLRNLLTHQVSALMTEHKKRI 182

Query: 158 DPVRGRLLRTLLGAGFSARLSKAMLEKLPTGQTYAEGMAYVRAELIRAVP------VHED 211
           DPV   L   LL A FS  ++  +          A    Y  AEL+RA+P      +   
Sbjct: 183 DPVGAMLESKLLEAEFSPAVANKLA---------ALSQHYTPAELVRALPQSLANMLDNQ 233

Query: 212 EDALFAQGGVYALMGPTGVGKTTTTAKLAARCVMRFGADKLALVTTDSYRIGAYEQLRIY 271
            D +  QGGV AL+GPTGVGKTT+ AKLAAR     GAD++AL+TTD YRIGAYEQL  Y
Sbjct: 234 GDDIVKQGGVVALVGPTGVGKTTSLAKLAARFAAHHGADQVALITTDHYRIGAYEQLATY 293

Query: 272 GQILNVPVYAVKDAADLHLVLQDLRDKHMVLIDTVGMSQRDRAVPEQIAMLGQSPR-PVK 330
           G+I+  PV    D A+L  +L   R++ +VLIDT GM QRD  + +Q+  L  + R P++
Sbjct: 294 GKIMGCPVKQAHDLAELEQILYQFRNRKLVLIDTAGMGQRDMRLYQQLDNLTANSRIPIR 353

Query: 331 RLLLLNATSHGDTLNEVVHAYRHGNDLTGCIFTKVDESTHPGALIDTVIRHRLPVHYISS 390
             L+L+AT     L + V+ ++    L+G + TK+DES      +  +I+  LP+ Y++ 
Sbjct: 354 SYLVLSATGQRRVLQDAVNHFKR-IPLSGVVLTKLDESVSLAGALSVLIQSGLPLSYVTD 412

Query: 391 GQKVPENLMQADRAQLVD 408
           GQ+VPE++  AD   L +
Sbjct: 413 GQRVPEDMKVADTLLLAE 430