Pairwise Alignments

Query, 699 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

Subject, 697 a.a., flagellar biosynthesis protein FlhA from Vibrio cholerae E7946 ATCC 55056

 Score =  730 bits (1884), Expect = 0.0
 Identities = 378/682 (55%), Positives = 503/682 (73%), Gaps = 15/682 (2%)

Query: 23  LAGPILIIMILSMMVLPLPPFLLDLLFTFNIAMSVMVLLVSMYTMKALDFAAFPAVLLFS 82
           +  P++++  L+M+VLP+P FLLDL FTFNIA+S++VLLV++YT + LDFAAFP VLL +
Sbjct: 22  IGAPVMVLAALAMVVLPMPAFLLDLFFTFNIALSLVVLLVTVYTRRPLDFAAFPTVLLIA 81

Query: 83  TLLRLSLNVASTRVVLMHGHTGPDAAGKVIEAFGHFLVGGNFAVGVMVFIILVLINFMVI 142
           TLLRL+LNVASTRVVL++GH GP AAG VIEAFG+ ++GGN+AVG++VF+IL++INFMV+
Sbjct: 82  TLLRLALNVASTRVVLLYGHEGPGAAGNVIEAFGNVVIGGNYAVGLVVFLILMIINFMVV 141

Query: 143 TKGAGRIAEVGARFMLDAMPGKQMAIDADLNAGLIGEEVARKRRQEVAQEADFYGSMDGA 202
           TKGAGRI+EV ARF LDA+PGKQMAIDADLNAGLI +E AR RR EV +EADFYGSMDGA
Sbjct: 142 TKGAGRISEVSARFTLDALPGKQMAIDADLNAGLIDQEQARVRRFEVTKEADFYGSMDGA 201

Query: 203 SKFVRGDAIAGLLIMVINIIGGLIVGMVQHGLDFSTAGKTYTLLAIGDGLVAQIPALVIS 262
           SKFV+GDAIAG+LI+ INIIGGL +GM+Q+ L F  A + YTLL IGDGLVAQIP+L++S
Sbjct: 202 SKFVKGDAIAGILILFINIIGGLSIGMIQYDLGFKEAIEIYTLLTIGDGLVAQIPSLLLS 261

Query: 263 TAAGVIVSRVTTDEDVGSQLTGQLFANPQVLFLTAGIVGLLGMIPGMPNLAFLLIA---- 318
             A ++V+R  TDED+G Q+  QLF NP+ L +TAGI+ ++G++PGMP+ AFL +A    
Sbjct: 262 IGAAIMVTRQNTDEDMGQQVIFQLFDNPKALTITAGILFVMGIVPGMPHFAFLFLALLAS 321

Query: 319 GGLVWLGRRLVKRKPQQQAAQEAAAAQAATLAPGGEMAEATWDDVAMVDPLGMQVGYRLI 378
           G   WL      RK + +A  +   A++    P     E +WDDV  VD +G++VGYRLI
Sbjct: 322 GAAYWL-----HRKQKTKAENKNLPAKSDVETP--TQRELSWDDVQPVDVIGLEVGYRLI 374

Query: 379 PLVDQSQQGELLGRIKSIRKKIAQDIGFLVPVVHIRDNLEIKPNTYVISLKDVEIGRGEA 438
           PLVD+ Q GELL R+K +RKK++QD GFL+P VHIRDNLE+ PN+Y I+L  V +G  E 
Sbjct: 375 PLVDKDQGGELLERVKGVRKKLSQDFGFLIPPVHIRDNLELTPNSYRITLMGVAVGEAEI 434

Query: 439 FPNQWMAINPGQVSGTLPGAPTRDPAFGLPAVWIDASQRQQAQVYGYTVVDACTVMATHL 498
            P+Q +AINPGQV G + G  TRDPAFGL AVWI   QR+ AQ  GYTVVD+ TV+ATHL
Sbjct: 435 RPDQELAINPGQVYGMIDGERTRDPAFGLDAVWIREDQREHAQALGYTVVDSSTVLATHL 494

Query: 499 NHLIQTHAAELLGRQEVQQLLDQIAKTAPKLTEDLVPKVLSLSTLHKVLQNLLDEEVPIR 558
           + L+  +AA+L+G +EVQ LL+ ++++APKL E+ VP  LSL  + KVLQNLL E +PIR
Sbjct: 495 SQLLTNNAAQLIGHEEVQNLLEMLSRSAPKLVENFVPDQLSLGVVVKVLQNLLHEAIPIR 554

Query: 559 DMRTILDVMAEHAPTIKDPTELTTLTRLALGRAITQQLFPGDAEMQVIGLDGALDGVLQQ 618
           D+RTI+  ++E+A   ++P  LT   R++L R I Q++   + E+ VI L   L+ +L Q
Sbjct: 555 DIRTIVQTLSEYASKSQEPDILTAAVRISLKRLIVQEINGVEPELPVITLIPELEQILHQ 614

Query: 619 ALSNSG----GIEPGIADNLLHQAQAAIQRQEQMGLAPVLVVQHSLRVLLSRFLRRSLPQ 674
            +  SG    GIEPG+A+ L      A Q QE  G   VL+    LR  L++F++ ++P 
Sbjct: 615 TMQASGGESAGIEPGLAERLQMALSHATQEQELKGEPAVLLTSGVLRSTLAKFVKNTIPN 674

Query: 675 LKVLSHAEIPDSRTIKITAAIG 696
           L+VLS+ EIPD + I+I  A+G
Sbjct: 675 LRVLSYQEIPDEKQIRIVQAVG 696