Pairwise Alignments

Query, 224 a.a., Chemotaxis protein CheD from Variovorax sp. SCN45

Subject, 176 a.a., CheD, stimulates methylation of MCP proteins (NCBI) from Rhodospirillum rubrum S1H

 Score = 95.9 bits (237), Expect = 4e-25
 Identities = 57/149 (38%), Positives = 78/149 (52%), Gaps = 6/149 (4%)

Query: 29  LLPSEYYVTAGDTVLSTVLGSCVAACLHDAEAGVAGMNHFMLPDDSESGMRDATDSMRYG 88
           L P   Y  A   V+STVLGSCVA CL D     AGMNHF+LP +         DS+RYG
Sbjct: 10  LTPGTLYCGAAPAVISTVLGSCVAVCLIDRHNRAAGMNHFVLPHNPA-----GEDSLRYG 64

Query: 89  TYAMDVLIRELVRAGARRDRLQAKVFGGGAVLA-NMTTLNIGDRNADFVLRYLRAERIEI 147
             A+D L   +   G     L+AKVFGG AVL    T  ++G +N    + +L A+ I  
Sbjct: 65  DVALDRLHARMGELGCETKDLRAKVFGGAAVLPFGATGDSVGTKNVKIAIEWLHAQGIPT 124

Query: 148 AAQDLRGPHARRVYFLPVTGKAIVRKLRA 176
            A+   G +   + F   TG+ +VR +++
Sbjct: 125 LARRTGGENGLLIRFYTATGRVLVRTIQS 153