Pairwise Alignments

Query, 224 a.a., Chemotaxis protein CheD from Variovorax sp. SCN45

Subject, 199 a.a., chemotaxis protein CheD, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (289), Expect = 5e-31
 Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 11/170 (6%)

Query: 27  VKLLPSEYYVTAGDTVLSTVLGSCVAACLHDAEAGVAGMNHFMLPDDSESGMRDATDSMR 86
           V + P E+YVTA + V+ T+LGSCVA CL+D +A V GMNHF+L  D         DS  
Sbjct: 9   VMIGPGEHYVTAKNEVIKTLLGSCVAVCLYDPKAQVIGMNHFLLAADRRK-FTHFLDSRA 67

Query: 87  --YGTYAMDVLIRELVRAGARRDRLQAKVFGGGAVLA-----NMTTLNIGDRNADFVLRY 139
             YG +AM++LI  +++ GA+R  LQ+K+FGG  VL+      +   +IG  N DFV  +
Sbjct: 68  GYYGVHAMEILINAMLKRGAQRKYLQSKIFGGANVLSLCADNILNHYDIGGMNIDFVRHF 127

Query: 140 LRAERIEIAAQDLRGPHARRVYFLPVTGKAIVRKL--RAQTEVRSIQREE 187
           L+ ERI I ++D+ G   R +YF P T  ++ R L      E+ S+Q EE
Sbjct: 128 LQRERIPIISEDIGGHCGRVIYFDP-TDYSVYRSLIEHKYEEIASLQDEE 176