Pairwise Alignments

Query, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  465 bits (1197), Expect = e-135
 Identities = 289/702 (41%), Positives = 410/702 (58%), Gaps = 38/702 (5%)

Query: 1   MDLSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTAL 60
           +D+ Q  + F VE  E L  +E  LL LD    D E LN IFRAAHSIKGGA TF    +
Sbjct: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62

Query: 61  TNTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGV 120
           +  TH +ET LD  R+ +  L  + +D  L++ D ++  L + +     +  +   +   
Sbjct: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122

Query: 121 LQQLALESGDESLAAHAAATAA---AAPVAAPAPAPVAAAA--------PAEAAVPAGDG 169
           LQ L  + G + + + A   ++    + + A A A   A A        P E    +G+ 
Sbjct: 123 LQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSGND 182

Query: 170 VLRI-RFARLSDSECDL-----LAGELSNLGKVLSRTRSNDQLTVLLETTCDPDDIVAVC 223
            LRI R  R   SE  +        EL+ +   L         T+ L      +D+  + 
Sbjct: 183 PLRILRELRELGSEYQIELDHQALPELAEIDPELCYL----SWTIRLTGDVSENDVRELF 238

Query: 224 CFVIDESQIDIT---REAAAAVVAPEPAAPAPAAEA-------PAKAPAVVAAAAPVAQA 273
            +V DE  + I     + A+A V  E AAPA   ++       P     + A   PVA  
Sbjct: 239 DWVEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATV 298

Query: 274 AP--AAPAATAAPAAAAGTKESSSIRVDVEKVDQLINLVGELVITQSMLTQAATMLDPVA 331
           AP  A P  +A    A      SSIRVD+EKVD LINLVGELVITQSMLT+         
Sbjct: 299 APVIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDK 358

Query: 332 YERFLSGLGHLERNARDLQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKE 391
            ++  +GL  L +N++DLQE+V++IRM+PM + FSRFPR++RD+  +LGK+V L   G++
Sbjct: 359 LDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQ 418

Query: 392 TELDKGLIERIVDPLTHLVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVIEVS 451
           TELDK ++ERIVDPL HLVRN +DHG+E PDVRLAKGK  TG + L A H GG+I++E+S
Sbjct: 419 TELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEIS 478

Query: 452 DDGAGLNRERILAKALQQGLPVSET----MPDEEVWQLIFAPGFSTAEQVTDISGRGVGM 507
           DDGAG++ +++  KA+++G+   +T    + D+++  LIFAPGFSTAEQV+DISGRGVGM
Sbjct: 479 DDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGM 538

Query: 508 DVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIESL 567
           DVV+RNI+E+GG +E+ S  G+G+   I LPLTLAIL+G  VKV D+ Y++PL  ++ES+
Sbjct: 539 DVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESI 598

Query: 568 QPLPEHLHSITADGHVIRVRGEYLPLIELHRVFDVAGAQTHPTQGILVIVQADDSRFALL 627
           Q     +        + R+R E +P++ L       G      + ++  V++   R  LL
Sbjct: 599 QINTASVKHAAGGIELYRLREENIPILRLQDEL-AMGRSGSLEKRLICFVESAGHRVGLL 657

Query: 628 VDELLGQHQVVVKNLETNYRKVPGISAATILGDGSVAFIIDV 669
           VD+LL Q QVV+K+LE+NY KV GIS ATILGDGSV+ I+D+
Sbjct: 658 VDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDI 699