Pairwise Alignments

Query, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  329 bits (844), Expect = 3e-94
 Identities = 250/784 (31%), Positives = 368/784 (46%), Gaps = 119/784 (15%)

Query: 8   QAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTALTNTTHVL 67
           Q F VEA E+L  + + L++L+    D + LNAIFR  H++KGGA     + L  T H  
Sbjct: 11  QDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCHGA 70

Query: 68  ETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQ-------------------- 107
           E + D  R+GQ  ++  ++D  L+  D + EQ  A Q  +                    
Sbjct: 71  ENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRLSKPA 130

Query: 108 -------------EPNPDMVAHICGVLQQLALESGDESLAAHAAATAAAAPV-------- 146
                        EP  ++V  I   + +  +E    ++     A+A++  +        
Sbjct: 131 SEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASASSGVIDKGSIDDI 190

Query: 147 --------------AAPAPAPVAAAAPAEAAVPAGDGVLRIRFARLSDSECDLLAGELSN 192
                            AP   +  APA A   A           ++D E + L  +L  
Sbjct: 191 NEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITDDEFEKLLDQLHG 250

Query: 193 LGKVLSRTRSNDQLTVLLET---TCDPDDIVAVCC-----FVIDESQIDITREAAAAVVA 244
            GK  S   +     V   T   T  P    A         + DE    +  E   +   
Sbjct: 251 KGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFEKLLDELHGSGKG 310

Query: 245 PE----PAAPAPAAEAP----------AKAPAVVAAAAPVAQAAPAAPAA-------TAA 283
           P       A  P A +P          A AP+   AA PVA+ A A PA          A
Sbjct: 311 PSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPA 370

Query: 284 PAAAAGTKES---------------SSIRVDVEKVDQLINLVGELVITQSMLTQAATMLD 328
           PAA   + ES               S++RVD   +D ++N+VGELV+ ++ L       +
Sbjct: 371 PAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSN 430

Query: 329 PVAYERFLSGLGHLERNARDLQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTY 388
               E     + +L+    DLQ +VM  RM P+  VF RFPRV+RD++  L K++ L+  
Sbjct: 431 D---EEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELR 487

Query: 389 GKETELDKGLIERIVDPLTHLVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVI 448
           G+ET+LDK L+E + DPL HLVRNS+DHGIE PD R   GK  TG+++LSA   G +I +
Sbjct: 488 GEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQL 547

Query: 449 EVSDDGAGLNRERILAKALQQGL---PVSETMPDEEVWQLIFAPGFSTAEQVTDISGRGV 505
            + DDGAG++ +++   A+++G+     +  + ++E + LIF PGFS+ E++TDISGRGV
Sbjct: 548 AIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGV 607

Query: 506 GMDVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIE 565
           GMDVVK  I  + G ++I S  G+GT   I +PLTLAIL  + V V    + LPL+ V E
Sbjct: 608 GMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNE 667

Query: 566 SLQPLPEHL---HSITADGHV-IRVRGEYLPLIELHRVF--DVAGAQTHPTQGILVIVQA 619
                  HL    +   DG + I VR + +PL  L           Q     G +VIVQ 
Sbjct: 668 IF-----HLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQI 722

Query: 620 DDSRFALLVDELLGQHQVVVKNLETNYRKVPGISAATILGDGSVAFIIDVGAMPRIQRAQ 679
              R  L+VD L+GQ +VV+K L+   +  PG+S ATI  DG +A I+DV   P + +  
Sbjct: 723 GSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDV---PDLLKQY 779

Query: 680 AASA 683
           AA++
Sbjct: 780 AAAS 783