Pairwise Alignments

Query, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

 Score =  280 bits (717), Expect = 2e-79
 Identities = 151/394 (38%), Positives = 245/394 (62%), Gaps = 8/394 (2%)

Query: 279 AATAAPAAAAGTKESSSIRVDVEKVDQLINLVGELVITQSMLTQAATMLDPVAYERFLSG 338
           A +   A  + +K+S ++RV++EK+D+L+NLVGE+VI ++  TQ AT  D    +   + 
Sbjct: 529 ATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNA 585

Query: 339 LGHLERNARDLQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKETELDKGL 398
           +G L   A +LQE VM +RM+P+ +VF+RFPR +RD +  L K++  +  G + ELD+ +
Sbjct: 586 VGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRTV 645

Query: 399 IERIVDPLTHLVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVIEVSDDGAGLN 458
           ++ + +PLTHL+RNSLDHGIE  D R+  GK   G L L A      + I + DDG G++
Sbjct: 646 LDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGID 705

Query: 459 RERILAKALQQGL---PVSETMPDEEVWQLIFAPGFSTAEQVTDISGRGVGMDVVKRNIQ 515
            E +  KA ++GL     +E + D E   +IF PGFSTAE V+D+SGRGVGMDVV+  I+
Sbjct: 706 PEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKIE 765

Query: 516 EMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIESLQPLPEHLH 575
            +GG V ++S  G+GT   + LPLT+AI+  + +++ +  Y LPL+ V++ +    E + 
Sbjct: 766 SLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQIK 825

Query: 576 SITADGHVIRVRGEYLPLIELHRVFDVAGAQTHPTQGILVIVQADDSRFALLVDELLGQH 635
           ++     +I  R   LP+I L    + +G  +      +V+V+ +  +  +++DE++G+ 
Sbjct: 826 NLEGQEAII-YRNHILPVIWLKDALNTSGF-SDSDDLYVVVVEKNKGKVGMILDEVIGRD 883

Query: 636 QVVVKNLETNYRKVPGISAATILGDGSVAFIIDV 669
           ++VVK L    + + G++ ATILGDG VA I+D+
Sbjct: 884 EIVVKPLTGILKNINGLAGATILGDGRVALILDL 917



 Score = 75.9 bits (185), Expect = 8e-18
 Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 2   DLSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQL-NAIFRAAHSIKGGAATFGFTAL 60
           D+ Q+ + F  EA E L  + Q +++L+    DSE++ N IFR+AH++KG A T GF  +
Sbjct: 3   DMEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHI 62

Query: 61  TNTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQE 108
           ++ TH +E +LD  R G++ +N  ++D   +  DAL+  ++    G++
Sbjct: 63  SSLTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGED 110