Pairwise Alignments

Query, 321 a.a., Flagellar motor rotation protein MotB from Variovorax sp. SCN45

Subject, 326 a.a., Flagellar motor protein from Pseudomonas stutzeri RCH2

 Score =  233 bits (593), Expect = 6e-66
 Identities = 134/311 (43%), Positives = 189/311 (60%), Gaps = 29/311 (9%)

Query: 8   IIIKHVHKGGGGGHHGGGWKIAYADFMTAMMAFFLVMWLLSISSPKQREGIAEHFRMPLR 67
           II+K V K  GG HHGG WKIA+ADF TAMMAFFLVMWL+S ++P+Q++ I+ +F+ P+ 
Sbjct: 7   IIVKRVKKVAGG-HHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYFQDPI- 64

Query: 68  VAMHGGDKASLSNSMIPGGGADV------MHVEGEVKQADAE----------EEADATRL 111
                G   S S  +I  GG         ++ E E  Q++A+          E+ +  RL
Sbjct: 65  -----GFTESASPHVIDLGGTPTPSPDRTLNPELEPAQSEAQIDSSQVETFAEQLERERL 119

Query: 112 AEMKKKLDELIEKSPVFQQFRSQILIDITTEGLRLQIVDTENRPMFELASARVVPHMRAI 171
             + ++L   ++++P  Q+F+ QIL +IT +GLR+QI+D ENRPMF L SA++ P+   I
Sbjct: 120 ELLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQPYFEDI 179

Query: 172 LRELAPALNGLPNKLTLSGHTDAIVYNNDRSYGNWELSADRANASRRELVVGGLTEGKVL 231
           L  L   +  +PNK+++SGHTDA  Y+    +GNWELS+ RANA+RR LV GG  E ++ 
Sbjct: 180 LLALVDTIAAVPNKISISGHTDAKPYSGRGDFGNWELSSGRANAARRTLVTGGYPEEQIA 239

Query: 232 RVIGLADSMHLDRAEPRNPINRRISIILLNRRTQERIERENSSDGGSMRVGKLTPAGAAP 291
           RV+G A S   DR +P NP+NRRI I++L ++ Q  IE E S        G +   GAAP
Sbjct: 240 RVVGYASSALFDRNDPFNPVNRRIDILVLTKKAQRSIEGEQS----DAAEGAVPAQGAAP 295

Query: 292 KAAAALPAQTP 302
             A   P Q P
Sbjct: 296 --AVQEPLQAP 304