Pairwise Alignments

Query, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  151 bits (381), Expect = 5e-41
 Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 5/179 (2%)

Query: 5   INTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKGLTQA 64
           +NTN  ++  Q  L K+   LN+++ RLSSG RINSAKDDAAG  I+NR TA  +GL  A
Sbjct: 5   VNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVA 64

Query: 65  TRNANDGISIAQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRLDEIN 124
            RNANDGISIAQT EGA+ E  + LQR+R+L++Q+  GTNSA++  ++  E     DE+N
Sbjct: 65  MRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELN 124

Query: 125 RVSNQTQFNGVKVLSANAGKLTVQVGANDGETIDIDLQEISAKTLGLDGFNVNGKGVSA 183
           R++  T F G K+L+ + G+ + Q+G++ GE I + L  + A     D F + G+   A
Sbjct: 125 RIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRA-----DDFRMGGQSFIA 178



 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 21/154 (13%)

Query: 419 VNGEVTV--ASTTGTGK---YAAQVGATAYINSAGKLTTD---TTSKGTKTT-------- 462
           +NG+  +  AS    GK   + A+       N +G L T+       G KTT        
Sbjct: 226 INGQTDLFKASVDQEGKLQIFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDITS 285

Query: 463 -----DPLAALDAALAKVDTLRGSLGAVQNRFDSVIANLGTTVTNLSSSRSRIEDADYAV 517
                + +  +DAAL  VD+ R  LGA QNR    I+NL     N+ +S+SRI+D D+A 
Sbjct: 286 VGGSQNAVGIIDAALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAK 345

Query: 518 EVSNMTRAQILQQAGTSVLSQANQTTQGVLSLLR 551
           E + +T++QILQQAGTS+L+QA Q     +SLL+
Sbjct: 346 ETTQLTKSQILQQAGTSILAQAKQLPNSAISLLQ 379