Pairwise Alignments

Query, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score =  151 bits (381), Expect = 5e-41
 Identities = 85/196 (43%), Positives = 121/196 (61%), Gaps = 3/196 (1%)

Query: 1   MAQVINTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKG 60
           MA  +NTN  ++  Q  L  +  A  S++ RLSSG +INSAKDDAAG  I+NR     +G
Sbjct: 1   MAVNVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LTQATRNANDGISIAQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRL 120
           L  A RNANDGIS+AQT EGA+ E  N LQR+R+LS+Q+  G+NS  D  +IQ EIT   
Sbjct: 61  LGVAVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALN 120

Query: 121 DEINRVSNQTQFNGVKVLSANAGKLTVQVGANDGETIDIDLQEISAKTLGLDGFN---VN 177
           DE+NRV+  T F G K+L+      + Q+GA++GE + ++++++ +    + G      N
Sbjct: 121 DELNRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAAN 180

Query: 178 GKGVSANTKANVNDLT 193
           GK  +   +A   DLT
Sbjct: 181 GKDKNWGVEAGKTDLT 196



 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 18/236 (7%)

Query: 324 GADTGTGASSIKLNGTTYNFAAGANSGFTYTKTVSKDDVKTAVAGAASTVNLGQGIFAST 383
           GAD G    ++ LN            G TY     KD      AG        +      
Sbjct: 150 GADNG---EAVMLNIKDMRSDNALMGGKTYQAANGKDKNWGVEAGKTDLTITLKDKREGD 206

Query: 384 VTFAAAGGQSSD-----TYMDNDKEMTKTASYTTDYAVNAV--NGEVTVASTTGTGKYAA 436
           VT +    +  D     TY++   +M K AS   +  +     N  +  A+T G G  A 
Sbjct: 207 VTISINAKEGDDIEELATYINGQTDMIK-ASVDEEGKLQLFTDNNRIDGAATFG-GALAG 264

Query: 437 QVGATAYINSAGKLTTDTTSKGTK--TTDPLAALDAALAKVDTLRGSLGAVQNRFDSVIA 494
           ++G    I +A  +T DT    T     + +A +DAAL  VD+ R  LGA QNRF+  I 
Sbjct: 265 ELG----IGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDSHRAELGAFQNRFNHAIN 320

Query: 495 NLGTTVTNLSSSRSRIEDADYAVEVSNMTRAQILQQAGTSVLSQANQTTQGVLSLL 550
           NL     N+++S+SRI+D D+A E + +T+AQIL QA +SVL+QA Q     L+LL
Sbjct: 321 NLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLAQAKQAPNSALALL 376