Pairwise Alignments

Query, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 1e-41
 Identities = 98/260 (37%), Positives = 144/260 (55%), Gaps = 7/260 (2%)

Query: 1   MAQVINTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKG 60
           MA  +NTN  ++  Q  L  +  A  +++ RLSSG +INSAKDDAAG  I+NR     +G
Sbjct: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LTQATRNANDGISIAQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRL 120
           L  A RNANDGISIAQT EGA+ E  N LQR+R+LS+Q+  G+NS ++  +IQ EIT   
Sbjct: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120

Query: 121 DEINRVSNQTQFNGVKVLSANAGKLTVQVGANDGETIDIDLQEISAKTLGLDGFN---VN 177
           DE+NR++  T F G K+L+      + Q+GA++GE + + L+++ +    + G +     
Sbjct: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180

Query: 178 GKGVSANTKANVNDLTKAGATGTG-PYTVTTSFAKVTAEQAVDAMQDGNTAVVGATTY-- 234
           GK      +A  ND+T       G   T+T +  +    + V    +G T +V A+    
Sbjct: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240

Query: 235 -KYDATAGNFTTTATVATGG 253
            +    AGN   T  VA  G
Sbjct: 241 GQLQIFAGNNKVTGDVAFSG 260



 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 81/252 (32%), Positives = 120/252 (47%), Gaps = 28/252 (11%)

Query: 325 ADTGTGASSIKLNGT--TYNFAAGANSGFTYTKTVSKDDVKTAVAGAASTVNLGQG---- 378
           A+T +   +  LNGT  T +F  GA++G     T+        + G  S V   +G    
Sbjct: 127 AETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYV-AAEGKDKD 185

Query: 379 ----IFASTVTFAAAGGQSSD-TYMDNDKE---MTKTASYT---TDYAVNAVNGEVTVAS 427
                 A+ +TF       +D T   N KE   + + A+Y    TD    +VN +  +  
Sbjct: 186 WKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQLQI 245

Query: 428 TTGTGKYAAQVGATAYINSAGKL---------TTDTTSKGTKTTDPLAALDAALAKVDTL 478
             G  K    V  +  +  A  +         T D TS G      +A +D+AL  VD+ 
Sbjct: 246 FAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGG-AQQSVAVIDSALKYVDSH 304

Query: 479 RGSLGAVQNRFDSVIANLGTTVTNLSSSRSRIEDADYAVEVSNMTRAQILQQAGTSVLSQ 538
           R  LGA QNRF+  I+NL     N+++S+SRI+D D+A E + +T++QIL QA +SVL+Q
Sbjct: 305 RAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVLAQ 364

Query: 539 ANQTTQGVLSLL 550
           A Q     LSLL
Sbjct: 365 AKQAPNAALSLL 376