Pairwise Alignments

Query, 551 a.a., Flagellin FliC from Variovorax sp. SCN45

Subject, 394 a.a., flagellin A from Sinorhizobium meliloti 1021

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 75/295 (25%), Positives = 116/295 (39%), Gaps = 51/295 (17%)

Query: 5   INTNSLSLLTQNNLNKSQAALNSAIGRLSSGMRINSAKDDAAGQAIANRFTANIKGLTQA 64
           I TN+ ++   + L    +++     R+SSG+R+ SA D+AA  +IA    ++     QA
Sbjct: 4   ILTNNSAMAALSTLRSISSSMEDTQSRISSGLRVGSASDNAAYWSIATTMRSD----NQA 59

Query: 65  TRNANDGISI-AQTTEGALTEVNNNLQRIRELSVQAGTGTNSATDLDSIQGEITQRLDEI 123
                D + + A   + A + + + ++ ++E+  +    T    D   IQ EITQ  D++
Sbjct: 60  LSAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQL 119

Query: 124 NRVSNQTQFNGVKVLSA--NAGKLTVQV---------GANDGETIDIDL--QEISAKTLG 170
             ++    F+G   L A  + G +T  V         GA   + +D  L    +   T G
Sbjct: 120 TSIAEAASFSGENWLQADLSGGPVTKSVVGGFVRDSSGAVSVKKVDYSLNTDTVLFDTTG 179

Query: 171 LDGF----------------NVNGKGVSANTKA-NVNDLTKAGATGTGPY------TVTT 207
             G                 NVNG        A NV+DL  A AT  G Y       +  
Sbjct: 180 NTGILDKVYNVSQASVTLPVNVNGTTSEYTVGAYNVDDLIDASATFDGDYANVGAGALAG 239

Query: 208 SFAKVTAE--QAVDAMQDGNTAVVGATTYKYDATAGNFTTTATVATGGPTTAFAA 260
            + KV     +AVD    G   V    T K+           T  TG P T  AA
Sbjct: 240 DYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVD--------TTVTGAPATNVAA 286



 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 88/372 (23%), Positives = 135/372 (36%), Gaps = 60/372 (16%)

Query: 197 ATGTGPYTVTTSFAKVTAEQAVDAMQDGNTAVVGATTYKYDATA---------GNFTTTA 247
           A G G   V T+++ +  E A++ +++    +V AT    D               T+ A
Sbjct: 66  ALGLGAAKVDTAYSGM--ESAIEVVKEIKAKLVAATEDGVDKAKIQEEITQLKDQLTSIA 123

Query: 248 TVATGGPTTAFAATLLPTAGNKFTGTFTGASGSTNFEVDSAGAITIGGQAAYISGGNL-- 305
             A+        A L   +G   T +  G      F  DS+GA+++      ++   +  
Sbjct: 124 EAASFSGENWLQADL---SGGPVTKSVVGG-----FVRDSSGAVSVKKVDYSLNTDTVLF 175

Query: 306 -TTNNVGAPPAATAATLFGGADTGTGASSIKLNGTTYNFAAGA---NSGFTYTKTVSKDD 361
            TT N G                 +    + +NGTT  +  GA   +     + T   D 
Sbjct: 176 DTTGNTGILDKVY------NVSQASVTLPVNVNGTTSEYTVGAYNVDDLIDASATFDGDY 229

Query: 362 VKTAVAGAASTVNLGQGIFASTVTFAAAGGQSSDTYMDNDKEMTKTASYTTDYAVNAVNG 421
                   A      QG +   V  AA G +    Y D           TT + V+    
Sbjct: 230 ANVGAGALAGDYVKVQGSWVKAVDVAATGQEV--VYDDG----------TTKWGVD---- 273

Query: 422 EVTVASTTGTGKYAAQVGATAYINSAGKLTTDTT--SKGTKTTDPLAALDAALAKVDTLR 479
                 TT TG  A  V A A I      T D T  ++       +A +D AL  + +  
Sbjct: 274 ------TTVTGAPATNVAAPASI-----ATIDITIAAQAGNLDALIAGVDEALTDMTSAA 322

Query: 480 GSLGAVQNRFDSVIANLGTTVTNLSSSRSRIEDADYAVEVSNMTRAQILQQAGTSVLSQA 539
            SLG++ +R D     +     ++ S   R+ DAD   E + +   Q  QQ     LS A
Sbjct: 323 ASLGSISSRIDLQSDFVNKLSDSIDSGVGRLVDADMNEESTRLKALQTQQQLAIQALSIA 382

Query: 540 NQTTQGVLSLLR 551
           N  +Q VLSL R
Sbjct: 383 NSDSQNVLSLFR 394