Pairwise Alignments

Query, 479 a.a., Flagellar hook-length control protein FliK from Variovorax sp. SCN45

Subject, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 89/361 (24%), Positives = 150/361 (41%), Gaps = 29/361 (8%)

Query: 87  LPADPNLAFLAPAHTPLHALTLAGRASAQAARGTNAADTAT--AAGAADAPLE--TAVQD 142
           +P     A  A   +P   ++ A  AS+QA + T    +A   A+  AD  L   T+  +
Sbjct: 306 MPLTQTFANTAALASPSAEVSEALAASSQALKATPLTQSALNPASIMADEGLNQSTSATE 365

Query: 143 PMAKALPDDATLSADAKLAPDADKAIAKTADLQALAKDAAAAKPGAPGSQPPADASPATA 202
                +P    +  D +LA       A T +L+A+ ++   AK   P +   + A   T 
Sbjct: 366 TGKVVIPWGTQMPTDNELA-------ALTPELKAMLEEGGKAKAPVPNALAQSVAQGLTP 418

Query: 203 LHDIASAAVAAQTVAVGTT----KPAASAGAPVGTAASGRAASGRTAASAATAEQLAGAA 258
            H      +AAQ    GTT     P A+    +   A    A       AAT      A+
Sbjct: 419 AH------LAAQQT--GTTALPMNPTAATPIDIAALAPQTVAVNPMLNPAATVNPELAAS 470

Query: 259 QSKAATADTKAAALPVAATAAATGGDDAQSTPTPIAIQQGATVTASAERSADAPATRPGA 318
            +  A    +A A      A +  G +  +     A  QG     +  R A++   +  A
Sbjct: 471 SAMLAALGGRALAGSDERRAVSESGQEDLAQQIAAAAGQGTAQNQALNR-AESQLVQTNA 529

Query: 319 HTIAPEVGSEKWAPALGQQLARMSTTGHHTAELNLNPAGLGPLKVTLSIGDNQAQAMFVS 378
             +   +  E  A  L +++  M +      ++ L+P  LG + + +++  + A   F  
Sbjct: 530 TPVP--LNKEMAADQLAERVQMMMSKNLKNIDIRLDPPELGRMHIRMNMQGDGATVHFTV 587

Query: 379 AHESVRKAVEAALPQLRNSLSEQGITLGQTSVGAEARQSFGQDAAFAQQNQQHQQQAARQ 438
           A++  R+A+E  +P+LR  L++QG+ LG TSV    +QS GQ   +  Q Q    Q+AR 
Sbjct: 588 ANQHAREALEQTMPRLREMLAQQGVQLGDTSV---QQQSAGQQQRYTGQEQSGFGQSARN 644

Query: 439 Q 439
           +
Sbjct: 645 E 645



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 13/95 (13%)

Query: 3   PMITPSVVANGSSAPSSAAQAGQRGR---GTDDAQGASFGAALDRSRAGNRNAAASRDGA 59
           PM+ P+   N   A SSA  A   GR   G+D+ +  S     D ++   + AAA+  G 
Sbjct: 455 PMLNPAATVNPELAASSAMLAALGGRALAGSDERRAVSESGQEDLAQ---QIAAAAGQGT 511

Query: 60  APSTDIASADRKTVRKPGTDEDTKDAPLPADPNLA 94
           A +  +  A+ + V+       T   P+P +  +A
Sbjct: 512 AQNQALNRAESQLVQ-------TNATPVPLNKEMA 539