Pairwise Alignments

Query, 654 a.a., Flagellar hook-associated protein FlgK from Variovorax sp. SCN45

Subject, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 4e-52
 Identities = 171/664 (25%), Positives = 286/664 (43%), Gaps = 51/664 (7%)

Query: 1   MSGSMFYTGLSGLGVARAALMTTAHNTANVYTAGYSRQVAEIATGGAISSGSGYIGTGAN 60
           M+  +   G   +  A+  L TT HN +NV T GYSRQ     T      G    G G +
Sbjct: 1   MASDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVH 60

Query: 61  VTTVSRSYDRYLTAQLASAQSNSVALATNGTQINRIDTLLADKTS-GISALMQNFFTSIQ 119
           V  V RS+D++   +L  A ++          ++ +  LL+   S  I   +  +F S++
Sbjct: 61  VENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVK 120

Query: 120 GVANTPADPAARQQMISSAQALASKFRSTDQYLSDLNTSVNEQIDGSVEQINVYATKIAS 179
            +A++P D  AR+ ++  ++ ++       + +       N+ +   VE+IN  A +I  
Sbjct: 121 SLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRD 180

Query: 180 LNQQISQATAMASGQPPNDLLDQRDLLVSQLSQVVDVKVLQQDNGK-YNVFIATGQSLVV 238
           L     Q   M    P NDL+D+ + LVS+LSQ   V V Q+ +G+ +N+ I  G +LV 
Sbjct: 181 L-----QRLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVS 235

Query: 239 GDYASQMVSVNSAADPTRKVVALKGFGGNTAELDDSTFKGGVLGGLMTFRSETLIPTQNS 298
           G  ASQ+  ++   D  +  +A+    G   +   +   GG +  ++  R E +    + 
Sbjct: 236 GTEASQLRVIDGFPDTQQHRLAM--VEGKALKAISARDIGGKMEAILDMRDEHIPYLMDE 293

Query: 299 IGRLAMSVSDAVNAQHKLGVDLNGALGQNFFNQAVPGVMSNAK----NTGNLEFGATLTD 354
           +GRLA+S S  VN     G+DL G +G   F      V++ ++    +    +    + D
Sbjct: 294 VGRLALSFSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRVVTNSNSKADMAVFIED 353

Query: 355 ASKLTTSDYDVSVTNVAGTLTYTVTRLSDKTSMGSFTTFPITFDGVSLNAASGTAQAGDS 414
            S+L   +Y +          + VT  S + ++       +  DG+ +   +   Q G+ 
Sbjct: 354 VSQLKGGEYSMQYNG----SEFVVTLPSGQQTVLPVVKGNVYVDGLRVEVRN-PPQVGER 408

Query: 415 FLVQPTRTGARDLDVLVRDPAKVAAASPLVTGNTAGNKGNAALSAATVDASYPGTPLAGP 474
            LV+PTR GA  + +   D  K+AA S     +T   +G A               +  P
Sbjct: 409 ILVRPTRNGAAAIRLATEDATKIAAQS--FEASTTFAQGKAKFKILQAGDVREFEVIVSP 466

Query: 475 VTLSFDAATGTLSGFPATSAVTVTLANGTSTTYAAGAAVPYTAGAKMSFDGVTVSMTGAP 534
               F              AVT T  N            PY     ++  G T  +T   
Sbjct: 467 TGDQF--------------AVTDTKGN------ILLQPQPYPPTGPVTVLGTTFELTEGA 506

Query: 535 SQGDTFTIKNNTSGVSDGSNALLLGALQRKTTMANGTATFNGAYSQLVSEVGNRAMAVKV 594
              D FT  N      D  N   +  +Q    M +  +T    Y  L ++VG     +K+
Sbjct: 507 LPNDKFT-ANLVPSEGDNGNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVG-----LKM 560

Query: 595 AAATQ--DSVTGQIKASQQ---SVSGVVQDEETANLLMFQQMYQANAKVIQTASTMFDAI 649
           A  T+  D    + +A+Q    S+SGV  DEE AN++ FQQ Y A++++IQ ++  F+ I
Sbjct: 561 ATMTRLTDVARLEKEAAQSRIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTI 620

Query: 650 LGIR 653
           L +R
Sbjct: 621 LALR 624