Pairwise Alignments

Query, 185 a.a., Transcription termination protein NusB from Variovorax sp. SCN45

Subject, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

 Score = 82.8 bits (203), Expect = 3e-21
 Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 14/144 (9%)

Query: 41  RSRAREFALQALYQHLVGRNDPTDIDHFTRDLAGF----HKA----------DALHYDAL 86
           R  AR+FALQA+Y   + + +   I+        +    H+A          D  ++  L
Sbjct: 10  RRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVSYFRDL 69

Query: 87  LHGSIEGAEQLDALIRPLLDRKFEEISPIEHAVMWIGVYEFQNCLDVPWRVVLNECIELA 146
           L G +    +LD+ +RP + R  +++  +E A++ + +YE     DVP++VV+NE IELA
Sbjct: 70  LAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINEAIELA 129

Query: 147 KEFGGTDGHKYVNAVLNGLAPQLR 170
           K F   D HK+VN VL+  AP +R
Sbjct: 130 KVFAAEDSHKFVNGVLDKAAPHVR 153