Pairwise Alignments

Query, 226 a.a., Flagellar basal-body rod modification protein FlgD from Variovorax sp. SCN45

Subject, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

 Score =  115 bits (287), Expect = 9e-31
 Identities = 67/178 (37%), Positives = 96/178 (53%), Gaps = 6/178 (3%)

Query: 28  EQRFLKLLVTQLNNQDPLNPMQNAELTSQLAQMSTVTGIEKLNTTLSGLVNQTGANQLLQ 87
           ++ FL LL  QL  QDP  P+ N ++ +Q+A  +TV GI K+NT    L +   +NQ LQ
Sbjct: 38  QEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSMTSNQALQ 97

Query: 88  ATSLIGYNVLSPGDILTTKKPDEGKDPATQAFGVELPGTAADVTIKIVDDKGNVVRTIDA 147
           A+SL+G +VL PG     KKPD G      A  V+LP +  ++ I+I ++ G +VRT D 
Sbjct: 98  ASSLVGRDVLVPG-AAGMKKPDGG-----MAAMVKLPQSIDNLFIRIENEAGQLVRTFDV 151

Query: 148 GPMKEGVNAVTWDGKDEAGNAVAAGAYRFTVDAKNGSAAVTSTALTFSQVAAVKQGAG 205
           G    G N V WDGKD+ GN +  G Y+          +      T++ V +V  G G
Sbjct: 152 GAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVSTYANVNSVLLGKG 209