Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 299 a.a., periplasmic component of amino acid ABC-type transporter/signal transduction system from Dechlorosoma suillum PS

 Score =  129 bits (324), Expect = 8e-35
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 3   LNLIAAAAAASALLLGTVAHADQ--LADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYE 60
           L L AAA   SAL    V   +   L  IK  G + +G   +  P ++ D K +Q++GY 
Sbjct: 5   LTLAAAAVIGSALCAAPVLAQESPTLKKIKDTGSITLGHRESSIPFSYYDDK-QQVIGYS 63

Query: 61  -------VDLVNAIAKKIGVKPVLKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQIDF 113
                  VD + A  K   +   L  +  A RI  LQ G VD+     T+N ER+ Q+ F
Sbjct: 64  HEMMLKAVDAIKAELKLAKLDVKLMPVTSANRITLLQNGTVDMECGSTTNNLERQKQVGF 123

Query: 114 SLTTFVTGQKAIVKKDSGITEVPQLAGKKVLTIRGGTQEPNIRK----AVPNVDVVTFDT 169
           S + FV G + + KKD+G+ + P LAGK V+T  G T E  IRK        +++++   
Sbjct: 124 STSIFVIGTRLMAKKDAGVKDFPDLAGKNVVTTAGTTSERLIRKMNEEKQMKMNIISAKD 183

Query: 170 SQQAFQALQQGKGVGYVDDEAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGETAL 229
             ++F  L+ G+ V ++ D+A L    AK   +   +VV+    S EA    ++K +   
Sbjct: 184 HGESFLTLESGRAVAFMMDDALLYGEMAK-AKRPGDWVVVGTAQSKEAYGCMLRKDDAGF 242

Query: 230 KAVVDDTLRELEKSGEAEKIFIKWY 254
           K VVD  L +   SGEAEKI+ KW+
Sbjct: 243 KKVVDAALTKAMTSGEAEKIYNKWF 267