Pairwise Alignments

Query, 231 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 7e-34
 Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 10/219 (4%)

Query: 4   FDYSLLLTGKYHDMLVAGLLLSLQLLAAALVLALPIALVVALLRLSPFAPLRWLGFAYVE 63
           FD+  +L  +   +L+  L  +L++ +  LV AL +AL +A +R+     L  L   Y+ 
Sbjct: 3   FDFHYML--ELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYIS 60

Query: 64  SIRNIPLLAHMLFWYFGAPELLPEGIKQWLYAGHIEAFSA-VIALALYTAAFMAEDIRSG 122
             R  PLL  +   Y+G P++ P      L  G ++AFSA VI L L+ AA+MAE IR+ 
Sbjct: 61  FFRGTPLLVQLFLLYYGLPQVFP------LLVG-LDAFSAAVIGLTLHFAAYMAESIRAA 113

Query: 123 IRAIPTVQFEAGRAMGFSYLATMRRVVLPQALRVTVPPLISQTLSLWKNTSIATVIGVAE 182
           I  I   Q EA  ++G +    MRR++LPQA RV +P L++  + + K+TS+A  +GVAE
Sbjct: 114 IIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAE 173

Query: 183 LMYQAGQVESATFRSFESFAFASAAYLTVSLAITGLATW 221
           +M +A    S++FR FE+F   +  Y  V L +T L +W
Sbjct: 174 IMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSW 212