Pairwise Alignments

Query, 236 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 365 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  152 bits (383), Expect = 1e-41
 Identities = 86/223 (38%), Positives = 132/223 (59%), Gaps = 8/223 (3%)

Query: 8   YWV----YFLIGQYPNGPLGGLMLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTG 63
           YW+    +  +   P    GGLMLT+++A+ G+  ALPLGI+L L R S    +R     
Sbjct: 137 YWLLHGGFLGLQTVPTSQWGGLMLTVVIAAVGIAGALPLGILLALGRRSDMPAIRVLCVT 196

Query: 64  FVFVVRGLPLLMVIFWAYFFLPSVT--GVKTDQFTTMLIALVVFDAAYLAEIVRAGIQGL 121
           F+   RG+PL+ V+F +   LP     G+  D+    ++ +V F+AAY+AE+VR G+Q +
Sbjct: 197 FIEFWRGVPLITVLFMSSVMLPLFLPEGMNLDKLLRAMLMVVFFEAAYIAEVVRGGLQAI 256

Query: 122 PRGQMETARALGLGYGRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGLAEV--S 179
           P+GQ E A A+GLGY R+  LV+LPQAL+ ++P +VN F++  K+TSL  IIGL +   S
Sbjct: 257 PKGQYEAAAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDFLNS 316

Query: 180 FIATQINTQVFTKPAQIYLILGGTYFILCFGLSRFAYWLERRL 222
                 +        + Y+     Y++ CFG+SR++  LER+L
Sbjct: 317 IKRATADPAWLGMSTEGYVFAALVYWMFCFGMSRYSMRLERKL 359