Pairwise Alignments

Query, 337 a.a., TRAP-type transport system, periplasmic component from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  152 bits (384), Expect = 1e-41
 Identities = 104/317 (32%), Positives = 165/317 (52%), Gaps = 8/317 (2%)

Query: 9   LRTAAAASTLA--LPLRQALAQKNAFNYKYANNLPVSHPMNLRAKEMADAIRAETNGQVD 66
           ++T   +  LA  L   QA+AQ+ A   +         P      E A  I+ ++ G++ 
Sbjct: 1   MKTGMISLALAGLLMASQAMAQE-ARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLT 59

Query: 67  IQIFPNNQLGSDTDVLSQLRSGGVEFFTLSGLILSTLVPSASISGVGFAFPDYASVWKAM 126
           ++IFPN+QLG+ T+++ Q+  G ++F       +   VP A ++   +   D+  + K +
Sbjct: 60  LEIFPNSQLGTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKII 119

Query: 127 DGDLGSHIRTQIAKANIVAMDKIWDNGFRQITSSSKPIASPADLKGFKIRVPVSPLWTSM 186
             D G  I  ++   +   M   W  G R  T++ KPI  PAD  G K+RVP S    + 
Sbjct: 120 ASDWGKGIVDEMRTEHKWRMVDSWYFGTRH-TTAKKPIEKPADFAGMKLRVPNSAPLLTW 178

Query: 187 FKALEASPTSINFAEVYSALQTKIVDGQENPLAIISTAKLYEVQKYCSMSNHMWDGFWFL 246
            KA+ ASPT + FAEVY ALQT  VDGQENPL II + K  EVQ + S++ H+      L
Sbjct: 179 AKAMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVIL 238

Query: 247 ANRRAWDKM-PADLQAIVAKHINAAGMRERADVAELNANLQKELSAKGMQINQPDPAAFR 305
            +   W+ + PAD Q +V +   A G      V++  ANL  +   +G+ + +PD AAF+
Sbjct: 239 MSEDTWNALEPAD-QKVVMEAFEAGGALNDKLVSDKEANLVSDFRERGITVVEPDKAAFQ 297

Query: 306 DQLRKAGFYAEWKSKYG 322
           + ++    YA+  +K+G
Sbjct: 298 EAMKPV--YADLDAKFG 312