Pairwise Alignments

Query, 646 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (465), Expect = 1e-50
 Identities = 110/430 (25%), Positives = 208/430 (48%), Gaps = 21/430 (4%)

Query: 234 VVLACVLCGIPIAFAFGLGTFGYLALTTDTALPVIIGRMDEGMS-HLILLAVPLFVFLGL 292
           +V+  ++ G+PIA + GL +  +L   +D +L  +   +    + H  LLA+P F+    
Sbjct: 9   LVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILAST 68

Query: 293 LIEMTGMAKAMVAFLASLLGHVKGGLSYVLVGAMYLVSGISGSKAADMAAIAPALFPEMK 352
            +   G+AK ++ F  +++G  +GGL+   V A  + + +SGS  A + AI   +   M 
Sbjct: 69  FMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMV 128

Query: 353 KRGADEGELVALLAATGAQTETVPPSLVLITIGSVTGVSIAALFTGGLLPAVILGLMLCV 412
           K G  +     ++   G     +PPS+V++   + T VS+  +F GG++P ++ GLML +
Sbjct: 129 KNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLII 188

Query: 413 VVFMRNRHEDLSQVARPPWKQVMRLALVALPALALPFVIRAAVVEGVATATEVSTIGIVY 472
            +++  R ++L +     WK+ ++ A  A   L L  +I   +  G+ T TE + +  VY
Sbjct: 189 AIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVY 248

Query: 473 AVVAGLVVYRQF----DWRRLGPMLVA----------------TASLSGAILLIIGTATA 512
           +      +YR      D     P+LV                    L+  ++ II  A  
Sbjct: 249 SFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALI 308

Query: 513 MAWGLTQSGFSRWLAEAMASLPGGAPMFLAVSLVTFVVLGSVLEGIPAIVLFGPLLFPIA 572
           +   LT+    + + E+M S   G   FL V  +  +V G  +E    +V+  PL+FPIA
Sbjct: 309 LKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIA 368

Query: 573 RQLGIHEVHYAMVVVLSMGLGLFAPPLGVGYYAACAIGRVRPDAGIRPIVGYMLALLVGT 632
             LGI  +H  +++V++M +G+  PP+G+  +    + ++     ++  + ++  + +  
Sbjct: 369 IALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFL 428

Query: 633 IAVAAIPWLS 642
           I V  +PW+S
Sbjct: 429 IIVTYVPWVS 438



 Score = 25.0 bits (53), Expect = 0.007
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 16/111 (14%)

Query: 189 LFRD---FDWKTSTKAFAVVVTLILAFTLGRAVFEDLGRLNLLVFFV---GVVLACVLCG 242
           ++RD   F  KT+TK   V V         +A   D G+L +++ F+    ++L  VL  
Sbjct: 256 IYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILKHVLTE 315

Query: 243 IPI-------AFAFGLGTFGYLALTTDTALPVIIGRMDEGMSHLILLAVPL 286
             I         + GLG   +L +     L +++G      S L+++  PL
Sbjct: 316 ERIPQMITESMLSAGLGPITFLIVVN---LILLVGGQFMEPSGLLVIVAPL 363