Pairwise Alignments

Query, 356 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Variovorax sp. SCN45

Subject, 316 a.a., ubiquinol oxidase, subunit II (RefSeq) from Shewanella loihica PV-4

 Score =  288 bits (737), Expect = 1e-82
 Identities = 138/301 (45%), Positives = 203/301 (67%), Gaps = 11/301 (3%)

Query: 18  ILKNLRRSLLLLPAVLLAGCNTVLMNPSGDIAHQQGRLIVVSTVLMLIIIIPVIALTIFF 77
           +++N  ++   + A++LAGC   +++P G +   + +LIV++T+LMLI++IPVI +T++F
Sbjct: 2   LIRNFAKASCAMAALMLAGCEGGVLDPKGQVGIDEKQLIVIATLLMLIVVIPVIVMTLYF 61

Query: 78  AWRYRQSNKEATYSPDWDHSTQLELAIWAAPLLIIIALGAITWISTHVLDPYQPLRRLDA 137
           AW+YR       Y+P W HS  +EL +W  P++I+  LG ITW STH LDPYQPL     
Sbjct: 62  AWKYRDGRDHEIYAPKWAHSKTIELVVWCVPIVIVGILGVITWHSTHKLDPYQPLEH--- 118

Query: 138 QRPIPADTKPLVVEVVALDWKWLFIYPEQGIATVNELAAPVDRPISFKITASSVMNSFFI 197
                 + +P++VEVV+L+WKWLFIYPEQGIA+VNELA P + P++FKI++ + MNSFFI
Sbjct: 119 ------EAEPIIVEVVSLNWKWLFIYPEQGIASVNELAFPANVPVNFKISSDTAMNSFFI 172

Query: 198 PALAGQIYAMPGMETKLHAVINKPGEFDGFSANYSGAGFSGMRFKFHGL-SDGDFDQWVQ 256
           P L  QIY+M GM TKLH + N+PG + G SANYSGAGF+GM+F      +  DF+ WV 
Sbjct: 173 PQLGSQIYSMAGMTTKLHLIANEPGTYKGISANYSGAGFTGMKFNAIATPTRDDFNAWVA 232

Query: 257 KVKSGKDGELTRELYKKLEAPSEREPVRHYAAVDPALYDAILNLCVDRNKMCMKEMMAID 316
           KVK  +   L +E Y++L   S   PV +YA+V   L++ I+   + +++M  +E MA+ 
Sbjct: 233 KVKR-EGAALGQESYRELAKESSNNPVSYYASVSDGLFEQIVMQYMHQHQMPAQEGMAMP 291

Query: 317 A 317
           A
Sbjct: 292 A 292