Pairwise Alignments

Query, 181 a.a., Dna binding response regulator PrrA (RegA) from Variovorax sp. SCN45

Subject, 178 a.a., two component Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (281), Expect = 3e-30
 Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 2/172 (1%)

Query: 8   RQLLIVEDDDAFARTLGRSFERRGYAVTHASNLEEAGALLETMSPGYAVVDLKLNGEASG 67
           ++LLI+ED+ +FA  L R   + G+    A +  +A        P + ++D+KL  E +G
Sbjct: 2   KRLLIIEDEQSFAGILARRMGKHGFECELAHDATQALLKARQFKPSHILLDMKL-AEDNG 60

Query: 68  LACVQMLHRHNAKMLIVVLTGFASIATAVEAIKLGACHYLAKPSNTDD-IEAAFGRATGT 126
           LA +  L     + ++V+LTG+ASIATAVEA++LGA +YL KP++T   +     +A   
Sbjct: 61  LALIAPLKGAVPQAVLVLLTGYASIATAVEAMRLGADNYLTKPADTATLLRVLDDKAPKA 120

Query: 127 TEVELTNRSTSIKTLEWERIHETLAETGFNISETARRLGMHRRTLARKLGKQ 178
              E+     S K +EWE + + L     N+S TAR+LGMHRRTL RKL K+
Sbjct: 121 IAPEVDEAPLSPKRVEWEHLQQVLTANKGNVSATARQLGMHRRTLQRKLLKK 172