Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  185 bits (469), Expect = 1e-51
 Identities = 109/290 (37%), Positives = 163/290 (56%), Gaps = 9/290 (3%)

Query: 1   MDSFSGLESFVRAADQLSFAKAGRQLGISASAVGKNVARLEQQLGVRLFNRTTRHTRLTQ 60
           MD ++ +  FV   +  SF++A R+LGI+ SAV K ++ LEQ LGV+L  RTTR   LT 
Sbjct: 1   MDIYANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTD 60

Query: 61  EGALFHE---RCRRILDELDDARAMMQDAVAAPRGRLRVSLPTI-GYRFLLPVLPEFKVA 116
            G  ++E   +   ++ +  DA A  Q AV   +G L+VSLP + G R + P+L EF   
Sbjct: 61  AGRQYYEYVHQAAALMQQAQDALASQQGAV---QGSLKVSLPNVFGQRHIAPLLSEFSRQ 117

Query: 117 YPEIELDLDFNDRLVDVIAEGVDVAIRSGELIDSQLVARRLGPFQFVLVASPAYLAQHGE 176
           YP I L++  +DR+VD++ EG+D+ +R G+L DS LVA +L P   +L ASP YLA    
Sbjct: 118 YPTINLEVSLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSH 177

Query: 177 PRVPAELANHACLRYKFVTGGKIEEWDLPGLPEQLP--ATLLCNNMEAMLGAAVAGLGVA 234
           PR  A+L  H CL Y +  GG    ++  G   ++     +  NN E +    + G+G+A
Sbjct: 178 PRSLADLRGHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIA 237

Query: 235 YMPDFLARDSLGRGELRCVLAGHIARQGQFSALWPSSRQLSPKVRAFVDF 284
            MP +L  + L  G L  VL+ + A      AL P  + +  ++R F+DF
Sbjct: 238 LMPRYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDF 287