Pairwise Alignments

Query, 635 a.a., Selenocysteine-specific translation elongation factor from Variovorax sp. SCN45

Subject, 638 a.a., selenocysteine-specific elongation factor SelB from Pseudomonas stutzeri RCH2

 Score =  581 bits (1497), Expect = e-170
 Identities = 329/638 (51%), Positives = 411/638 (64%), Gaps = 15/638 (2%)

Query: 1   MIIGTAGHIDHGKTTLVRALTGVDTDRLPEEKRRGISIELGYAYLHAPDGVSLGFVDVPG 60
           MI+GTAGHIDHGKT L++ALTG   DR  EE+ RGI+I+LGY Y    +G   GF+DVPG
Sbjct: 1   MIVGTAGHIDHGKTALLQALTGQQGDRRREERERGITIDLGYVYADLGEGSLTGFIDVPG 60

Query: 61  HERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATVAITKIDRIDES 120
           HER +H MLAGA+GID  LLVVAADDGVMPQTREHLA+V LLG+R A VA+TKIDR++  
Sbjct: 61  HERFVHNMLAGASGIDCVLLVVAADDGVMPQTREHLAIVELLGIRRALVALTKIDRVE-- 118

Query: 121 MREARLAEVRSDIAALLAPTPLAGAPMLAVSATTGEGVDTLRERLLDVASKARAREDDLA 180
              AR+AEV+  I  LL   PLAGAP+  VS+  G+GVD LR  L++ A++  AR     
Sbjct: 119 --TARIAEVQRQIENLLVTGPLAGAPIFPVSSIRGDGVDALRTALIEEAARTAARSASGH 176

Query: 181 FRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGDRSVRVRGIHAQNQKAESAHAG 240
           FRLA+DRAF+++G G VVTGT F+G VRIGDEL + P  + VRVRG+HAQN++A+ AHAG
Sbjct: 177 FRLAIDRAFSVTGAGVVVTGTAFAGRVRIGDELLLGPTGKRVRVRGLHAQNREADEAHAG 236

Query: 241 QRCALALAG--VTKDEMHRGDWVCAPAIALATDRIDVLLTLWPDEAKPLRSGTTVHAHLG 298
           QR AL LAG  +  +++HRGDW+  P +   T RID+   L P EA  L+    VH HLG
Sbjct: 237 QRVALNLAGERLAVEQIHRGDWLLHPLLHTPTQRIDIDFKLLPGEAHELKHWAPVHVHLG 296

Query: 299 ASDVMASLALLDRDALAPGETALAQLVTKESVGAWHGDRGVLRDASATRTMAGVRVLDPF 358
           A DV A +ALL+  +LAPGE A AQL+      A HGDR VLRD SA RT+ G RVLDP+
Sbjct: 297 AQDVTARVALLEDASLAPGEHAFAQLLLNAPSHAVHGDRIVLRDQSAQRTLGGGRVLDPY 356

Query: 359 APVRYRRLPERLRTLAGWAIDDRAARVAALLHNAPLGIDTARLARALSLPDEAALPLPAD 418
           AP R RR   RL  L           +  LL +A  GID   LAR  + P E    LP  
Sbjct: 357 APPRNRRRAARLEQLRALDQPSLEQALPQLLASATNGIDPQSLARQFNRPRE-GWQLPHG 415

Query: 419 AVRIEHTAIAQRHLD-----ALDAQITGRLADFHHDAPDEVGPDARRLRRLAAPRTDDAL 473
            V +  T +  R  D      LD  +   L  FH + PDE+GPD  RLRR A P+ +  +
Sbjct: 416 VVEV-GTRLGPRMFDQARWSELDTTLLAALQRFHEEQPDELGPDRDRLRRYALPQLERPV 474

Query: 474 WRHALDALVARGALVRSGTWLHLPDHAARLGEAEQKLAQKLLPRLADGGFDPPWVRDLAK 533
           +   L+  +A G +  SG WLH PDH  RL +AE+ L ++L P L  G FDPPWVRDLA+
Sbjct: 475 FIALLEQALAAGRIETSGPWLHRPDHRVRLSDAEEGLKERLWPLLEAGQFDPPWVRDLAR 534

Query: 534 DCSASEPMVRQTLASLARRGEAFQVVKDLYYPLATIERLAAIARDCLDGPEG-LQAASFR 592
           D    E  +R  L  LAR G   QVVKDL+YP  TI +LA      L+   G ++AA+FR
Sbjct: 535 DLGVDETQMRNLLRKLARLGLLQQVVKDLFYPEFTIRQLAGHVLQ-LEAQSGVIRAAAFR 593

Query: 593 DATGLGRKRAIQLLEFFDRVGLTRRVKDAHLLRPDTSL 630
           D   LGRKR+IQLLE FDR+GLTRR  +   +RPD++L
Sbjct: 594 DRIQLGRKRSIQLLEHFDRIGLTRRFGNERKVRPDSAL 631