Pairwise Alignments

Query, 635 a.a., Selenocysteine-specific translation elongation factor from Variovorax sp. SCN45

Subject, 468 a.a., selenocysteine-specific translation elongation factor from Methanococcus maripaludis S2

 Score =  154 bits (389), Expect = 8e-42
 Identities = 92/261 (35%), Positives = 149/261 (57%), Gaps = 10/261 (3%)

Query: 3   IGTAGHIDHGKTTLVRALTGVDT----DRLPEEKRRGISIELGYAYLHAPDGVSLGFVDV 58
           +G  GHIDHGKTTL + LT + +    D+LPE ++RGI+I++G++     +   +  VD 
Sbjct: 8   LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKL-ENYRITLVDA 66

Query: 59  PGHERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATVAITKIDRID 118
           PGH  L+  +++ A  ID AL+VV A +G   QT EH+ ++    +    V ITK D  +
Sbjct: 67  PGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNI-PIIVVITKSD--N 123

Query: 119 ESMREARLAEVRSDIAALLAPTPLAGAPMLAVSATTGEGVDTLRERLLDVASKARA-RED 177
               E +  E+    + L +   L  + ++ +SA TG GV+ L+  +++  + A   R  
Sbjct: 124 AGTEEIKRTEMIMK-SILQSTQNLKNSSIIPISAKTGFGVEELKNLIINTLNNAEIIRNT 182

Query: 178 DLAFRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGDRSVRVRGIHAQNQKAESA 237
           +  F++ +D AF + G GTVVTGT+  G V++GDEL+V+P + S +VR I    +    A
Sbjct: 183 ESYFKMPLDHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQCFKESVMEA 242

Query: 238 HAGQRCALALAGVTKDEMHRG 258
            AG R  +A+ GV   +++RG
Sbjct: 243 KAGDRVGMAIQGVESKQIYRG 263