Pairwise Alignments

Query, 286 a.a., ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) from Variovorax sp. SCN45

Subject, 334 a.a., phosphonate ABC transporter, periplasmic phosphonate binding protein from Pseudomonas stutzeri RCH2

 Score = 96.3 bits (238), Expect = 8e-25
 Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 13/280 (4%)

Query: 2   MKKTFTRLALALSLSAASLGAFAQGVLRVS--AIPDEAPTELQRKFTPLGDYLKKETGMD 59
           M K F+R   A +L A ++   AQ    ++   I  E+   L+  + P    + K+TG +
Sbjct: 1   MLKRFSRALAASTLLAGAMFGTAQAAETITFGIISTESSQNLRSVWDPFLADMSKQTGYE 60

Query: 60  VQFTPVTDYAAVVEGLATNKIDLAWLGGFTFVQARIRTNGGAVPIVQRAEDEV-FTSKFI 118
           V+     DYA V++G+  +K+DLAW G  + ++A  R  G        A     + S  I
Sbjct: 61  VKAFFAPDYAGVIQGMRFDKVDLAWYGNKSAMEAVDRAGGEIFAQTVAANGSPGYYSHLI 120

Query: 119 VPVDSTAKTLADL----KGKTFAFGAPSSTSGSLMPRYFLL-QAGINPEKDFKTVAFSGA 173
           V  DS   ++ D+    K  TFA G P+STSG L+P Y++  ++ ++  + FK  + +G+
Sbjct: 121 VHRDSALNSVEDVLKNAKSLTFANGDPNSTSGYLVPGYYVFAKSKVDAGQAFKR-SLNGS 179

Query: 174 HDATVAFVAASRAEAGVLNASVWDKLVEAKNPNAAKVRVLATTPTYYDYNWTVRPGLDPA 233
           H+     VA  + + G  N+   ++L       AA+++++ T+P         R  L   
Sbjct: 180 HEVNALSVANKQVDVGTFNSEGMERLEITAPDKAAQLKIVWTSPLIPADPLVWRKNLSDE 239

Query: 234 LTRKLADAFLKLDPANPAHKEIMALQRASKFIPTKSSNYD 273
              +L + F+    A PA KEI+A     ++ P ++S+ D
Sbjct: 240 QKNRLREFFMSYG-AKPAEKEILA---GLQWAPFRASDND 275