Pairwise Alignments

Query, 286 a.a., ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) from Variovorax sp. SCN45

Subject, 284 a.a., phosphonate ABC transporter, periplasmic phosphonate-binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (384), Expect = 8e-42
 Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 16/264 (6%)

Query: 31  SAIPDEAPTELQRKFTPLGDYLKKETGMDVQFTPVTDYAAVVEGLATNKIDLAWLGGFTF 90
           +AIPDE  ++L+ +F  +  YL+ E G+ V + PV  Y+A V     N++ LAW GG + 
Sbjct: 27  TAIPDENESQLKTRFNKVAKYLETELGVKVNYVPVKSYSAAVTAFRNNQVQLAWFGGLSG 86

Query: 91  VQARIRTNGGAVPIVQRAEDEVFTSKFIVPVDS---TAKTLADLKGKTFAFGAPSSTSGS 147
           VQAR R   G+  I Q  ED+ F S FI    +    +    +L G TF FG+  STSG 
Sbjct: 87  VQAR-RLVPGSQAIAQGYEDQYFKSFFIANASTPLEQSTNFPNLNGYTFTFGSKGSTSGR 145

Query: 148 LMPRYFLLQAGINPEKD-FKTVAFSGAHDATVAFVAASRAEAGVLNASVWDKLVEAKNPN 206
           LMP++++ +      KD F  + FSG H  T+A V A   + G +N  VW+  V     +
Sbjct: 146 LMPQFYIERNMGKQVKDIFTRIGFSGDHSRTIAQVEAGAYQVGAVNYKVWETAVANGTVD 205

Query: 207 AAKVRVLATTPTYYDYNWTVRPGLD----PALTRKLADAFLKL-DPANPAHKEIMALQRA 261
            +KV+V+  TP Y DY WTVR   D       T KL  A L++ DP      +++A    
Sbjct: 206 TSKVKVIWETPAYPDYQWTVRADADQRFGAGFTEKLTKALLEMKDP------DLLASFPR 259

Query: 262 SKFIPTKSSNYDGIETAGKSAGLI 285
             F+   +++Y+ IE+   + GL+
Sbjct: 260 QSFVEADNADYEPIESVATAIGLL 283