Pairwise Alignments

Query, 1131 a.a., Type IV fimbrial biogenesis protein PilY1 from Variovorax sp. SCN45

Subject, 1148 a.a., type IV pilin biogenesis protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.7 bits (221), Expect = 1e-21
 Identities = 186/720 (25%), Positives = 261/720 (36%), Gaps = 169/720 (23%)

Query: 406  SASGYWHETESNTAAVRMDLWHAALNSRGTFTPASNANALSDAFRSIIGQIL-LNTSVPL 464
            S S Y        A+    L H A    G +  A+N + L  +   +   IL  N S   
Sbjct: 403  SVSTYTIGFSQGAASAAGLLRHTAEKGGGKYYDATNVDDLQKSLMQVFKNILEKNASFTA 462

Query: 465  TSISASA-SRVSTGTAVYRAGY---DTADWSGTLTATRFGSSGQL--------------- 505
             +++++  +R+ T  +VY + +       WSG L   +   SG +               
Sbjct: 463  PAVASNNFNRIRTFDSVYYSMFLPNRGPRWSGNLKKFKVTDSGDIIDASKAKVIDGDGNI 522

Query: 506  --------ESSADWSARDLLDARMAARGA-----HDSNRKVLS-FSGTAAATATSAATRG 551
                     SSAD SA D  D R              +R +LS   G    T ++A T+ 
Sbjct: 523  AKTACSHWSSSADCSAGDGNDVRRGGAAGMLQRMQARDRNLLSDVGGLKPLTLSAARTKA 582

Query: 552  SGIPFRWASLSDTQKAALKGSTSSDDASIALGRAVLDFLRG----DRSNEGAGLELRKRG 607
             G         D   A L G   S+ AS+      +D+ RG    D ++ G   E+R   
Sbjct: 583  GG---------DGALATLLGVEESEVASL------IDWARGVDVDDDNDNGDRTEMR--A 625

Query: 608  HVLGDIVGSSVWYAGKPNSGFTNDAYAKFASIARTPM-VYVGANDGMLHAF-NAGTG-QE 664
             V+GD + S      KP +         F S     + V VG N G+LH F + GT   E
Sbjct: 626  DVMGDPLHS------KPLA-------INFGSEGSPDIRVIVGTNHGVLHMFKDEGTSVSE 672

Query: 665  AFAYVPEGLYGTAAAPKLKRLSEGSYSHR---YYVDGSPFVADIYMGATATASTTDAEKV 721
            ++AY+P  +      PK   L E   S R   Y +DGSP VA +  GA+           
Sbjct: 673  SWAYLPWEML-----PKQATLRENLPSGRHSVYGIDGSP-VAWVKNGASGIQ-------- 718

Query: 722  AAWKSFLVGTLGAGGKGYFVLDVTKPQDIDETRARETALIDTTALSDDDLGHQFQQPALD 781
               K++L   L  GG  Y+ LD+T P        R    ID  +   D LG  + +P + 
Sbjct: 719  ---KAWLFFGLRRGGDAYYALDITNPD-----APRFMWRIDGNSPGMDLLGQSWSKPVVT 770

Query: 782  SFSRRALQVASLKNGRKAVILGNGYNSASEKAMLWIQYLDGDKSILKIPAPVTQV----- 836
                R             +ILG GY S S K +  +   D   + + I    T       
Sbjct: 771  FIPGR--------ESSPVLILGGGY-SPSNKDIPGVGTPDNLGTAVFIVDAATGALVHAF 821

Query: 837  --TGTGNGLSAP----------RVVDRDGDGKVDFAYAGDLLGNMWRFDLSDPD----SR 880
                 GN    P           V+D + DG  D  YA D  GN+WR DL        +R
Sbjct: 822  GPNNAGNMTVMPGIKDSIPNEVAVLDANNDGLTDRIYATDTGGNVWRMDLPGATPKDANR 881

Query: 881  KWK----ATLGSAATAS-------------SLDNVPLFAAGATQPITAAPVVVGHPRGGY 923
            +W     A+LG   T S             +L+N   + +      T    V   P    
Sbjct: 882  RWSAFKFASLGGMTTGSDRRFFAAPVVAQTALNNTLEYTSREKGRTTTVTTVQTIPYDA- 940

Query: 924  MVVFGTGRLFAVGDDSS-----TANQYLYGIR--DGANGS---TGTAVLTDLVAQTVGAS 973
             VV G+G   A  DD       T      GIR  DG+N          L DL   T    
Sbjct: 941  -VVVGSGIRPAPQDDQREDMFFTLQDRNIGIRSFDGSNKDRLPPSALTLADLYDVTSSPP 999

Query: 974  TVEEEGGEFRTVSNNSVNYSGSRAKRGWYFQLPTAKERIVYPGDALSSSAGLFSSTVPGS 1033
            T +EE   F T+             RGWY+      E+ +  G  +      F+S VPGS
Sbjct: 1000 TTKEEEVRFGTL-------------RGWYYNFTRKGEKSLSAGSIIRGRV-FFTSYVPGS 1045