Pairwise Alignments

Query, 309 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  344 bits (882), Expect = 2e-99
 Identities = 177/310 (57%), Positives = 231/310 (74%), Gaps = 18/310 (5%)

Query: 1   MGFFLETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSE-WFPL 59
           M FF E L GGL+ G++Y+L+AIGFVLIYKASGVFNFAQGAMVLF+AL      E   P 
Sbjct: 1   MEFFFEVLIGGLLAGVMYALVAIGFVLIYKASGVFNFAQGAMVLFSALTFVSLVERGVPF 60

Query: 60  WFGFQSQILANILAFVAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGIG 119
           W           LAF+ ++A M+++A  +ER+ L  L+N+  ITL MATLG++Y ++G  
Sbjct: 61  W-----------LAFLISLAAMLLIAVAVERVVLRPLINRSPITLFMATLGLSYVIEGFA 109

Query: 120 QTLFGNDIYKIDVGMPKEPLMVLEGTFQGGLLLSQEDLIAALVAAGLVVVLAIFFQKTAT 179
           Q L+G  ++ +++G+  EPL +      GG+LLSQ D+ AA+ AA LV++L+  F KT  
Sbjct: 110 QALWGAQVHGLELGISDEPLEL------GGMLLSQFDIFAAVTAAFLVLLLSWLFNKTRL 163

Query: 180 GRALRAVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGVQFSLSLVALKA 239
           G +LRAVADD  AA ++GI L+R+WV+VW+VAGF  LVAG++WG++LGVQFSLSLV LKA
Sbjct: 164 GLSLRAVADDPLAALAVGIRLQRVWVVVWAVAGFVGLVAGLLWGARLGVQFSLSLVVLKA 223

Query: 240 LPVVILGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFAYVLALVFLLVRPQG 299
           LPV+I+GG TSI GAI+GGL+IG  EKL+E+YLGP +G GIE WF YVLALVFLLVRP G
Sbjct: 224 LPVLIIGGFTSISGAIVGGLIIGASEKLAEVYLGPFIGSGIENWFPYVLALVFLLVRPAG 283

Query: 300 LFGEKIIDRV 309
           LFGE+ I+RV
Sbjct: 284 LFGERAIERV 293