Pairwise Alignments

Query, 309 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 6e-30
 Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 17/313 (5%)

Query: 1   MGFFLETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWFPLW 60
           M +F++ L  GL +G +Y +IAIG+ ++Y   G+ NFA G + +    A          +
Sbjct: 1   MEYFVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF 60

Query: 61  FGFQSQILANILAFVAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGIGQ 120
                 +LA ++  V  M    +  W IER+A            L  +  +A  +  IG 
Sbjct: 61  IAGVPVVLALLIMMVVGMLTAALWNWTIERVAYRP---------LRGSFRLAPLITAIGM 111

Query: 121 TLFGNDIYKIDVGMPKEPLMVLEGTFQG--GLLLSQEDLIAALVAAGLVVVLAIFFQKTA 178
           ++  ++  ++  G   +P+  L  +     G+ +S + +I  ++ A L+ V      +T 
Sbjct: 112 SIVLSNFIQVTQGPRNKPIPPLVSSVYDLFGISVSLKQIIIVVITAILLSVFWYIVNRTP 171

Query: 179 TGRALRAVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGVQFSLSLVA-- 236
            GRA RA   D + A  +G+ + R   + + +    A VAG ++    GV       A  
Sbjct: 172 LGRAQRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPG 231

Query: 237 LKALPVVILGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFAYVLALVFLLVR 296
           +KA    +LGG+ S+PGA++GGLLIG+ E L   Y         ++    +LA+V L+ +
Sbjct: 232 VKAFTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYK---DVATFSILAIV-LIFK 287

Query: 297 PQGLFGEKIIDRV 309
           P G+ G   +++V
Sbjct: 288 PSGILGRPEVEKV 300