Pairwise Alignments

Query, 416 a.a., Coenzyme A ligase from Variovorax sp. SCN45

Subject, 432 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

 Score =  125 bits (314), Expect = 2e-33
 Identities = 110/364 (30%), Positives = 170/364 (46%), Gaps = 25/364 (6%)

Query: 6   DKLEIRDPAERERDLLAALPRQIAQAQTTAPAFAKILD--GVKPADITTREALAKLPVTR 63
           + +E  D  E        L   +++     P + K +   GV P DI + + ++KLP T 
Sbjct: 5   ETIECMDREEMRELQSKRLSDTVSRVYHNVPFYRKKMQSMGVYPEDIESIDDISKLPFTT 64

Query: 64  KSELLELQKARRADDPFGGFASIVRGPRMPRVFASPGTIYEPE--GEARD---YWR--TA 116
           K +L       R + PFG F S+  G  + RV AS GT  +P   G  R     W    A
Sbjct: 65  KQDL-------RDNYPFGIF-SVPMG-EIVRVHASSGTTGKPTVVGYTRRDIAMWSEIVA 115

Query: 117 RALHAAGFRGGELIHNSFSYHMTPAGSIMESGARALGCTVFAGGTGQTEQQLEAMVDLKP 176
           RAL  AG    + I  ++ Y +   G  +  G   LG TV     G T++Q++ M D K 
Sbjct: 116 RALSCAGASRDDFIQIAYGYGLFTGGLGLHYGGEKLGATVIPISGGNTQKQIQLMADFKT 175

Query: 177 EGYAGTPSFLKILLEKAEEKGLKLP--SLTKALVSGEAFPPSLHDWIAAH-GVKGTQCYA 233
              A TPS+   L E  E+ G+     +L   +   E + PS+   I    G+K    Y 
Sbjct: 176 TVLACTPSYALYLAETLEDSGMTADDINLRVGIFGAEPWTPSMRKEIENKLGIKAMDIYG 235

Query: 234 TADL--GLIAYETSARQGLVIDEGVLV-EIVRPGTGDPVPDGEVGEIVVTSFNLD-YPLV 289
            +++    +A +   ++GL I+E   V EI+ P T  P+P G  GE+V T+   +  PL+
Sbjct: 236 LSEVMGPGVACDCEYQEGLHINEDHFVPEIIDPVTLKPLPAGSEGELVFTTITKEGMPLL 295

Query: 290 RFGTGDLSAVLAGTCPTGRTNKRIKGWLGRADQTTKVRGMFVHPSQVAEILRRFPEAQRA 349
           R+ T DL+++    C  GRT  R+    GR+D    +RG+ V PSQ+  +L    E +  
Sbjct: 296 RYRTRDLTSLNYEKCKCGRTLVRMNKCTGRSDDMLIIRGVNVFPSQIESVLLEMSETKPH 355

Query: 350 RLVV 353
            L++
Sbjct: 356 YLLI 359