Pairwise Alignments

Query, 416 a.a., Coenzyme A ligase from Variovorax sp. SCN45

Subject, 433 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

 Score =  131 bits (330), Expect = 3e-35
 Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 27/383 (7%)

Query: 5   YDKLEIRDPAERERDLLAALPRQIAQAQTTAPAFAKILD--GVKPADITTREALAKLPVT 62
           + K E  D  E E+  L  L   + +A    P + +  D  G+KP DI + + L K+P T
Sbjct: 3   WSKEETWDRKEIEKIQLERLKESVKRAYENVPLYKEKFDSVGLKPEDIKSLDDLKKIPFT 62

Query: 63  RKSELLELQKARRADDPFGGFASIVRGPRMPRVFASPGTIYEPE--GEARDYWRT----- 115
            K +        RA+ PFG FA  V    + R+ AS GT  +P   G  +   RT     
Sbjct: 63  VKDDF-------RANYPFGMFA--VPKKEVVRIHASSGTTGKPTVVGYTKKDIRTWAELI 113

Query: 116 ARALHAAGFRGGELIHNSFSYHMTPAGSIMESGARALGCTVFAGGTGQTEQQLEAMVDLK 175
           +R + AAG    +    +F Y +   G  +  G   +G +V    +G TE+Q+  M D +
Sbjct: 114 SRVVTAAGVTDDDTAQIAFGYGLFTGGFGLHYGLENVGASVIPMSSGNTEKQIMLMKDFE 173

Query: 176 PEGYAGTPSFLKILLEKAEEKGLKLPSLTKA---LVSGEAFPPSLHDWIAAH-GVKGTQC 231
                 TPS+   + E AE+ G+      K    L  GEA   S    I +  G+  TQ 
Sbjct: 174 TTVLICTPSYALYIAEVAEKMGIDPKKDLKVRIGLFGGEACSESARTEIESKWGILATQN 233

Query: 232 YATADL--GLIAYETSARQGLVIDEG-VLVEIVRPGTGDPVPDGEVGEIVVTSFNLD-YP 287
           Y  ++L    ++ +   + G+ I E   + EI+ P TG+ +P+GE+GE+V+T+   +  P
Sbjct: 234 YGMSELMGPGVSGDCEYQCGMHISEDHFIAEIIDPKTGEVLPEGEIGELVITTLTKEALP 293

Query: 288 LVRFGTGDLSAVLAGTCPTGRTNKRIKGWLGRADQTTKVRGMFVHPSQVAEILRRFPE-A 346
           ++R+ T D++++    C  GRT  R+    GR+D    +RG+ V P+Q+  +L    E  
Sbjct: 294 VLRYRTKDMTSLTYEKCKCGRTTARMLKIRGRSDDMLIIRGVNVFPTQIESVLEGIEEIG 353

Query: 347 QRARLVVSGEMGDDRMALQLECA 369
               ++V+     D+M + +E A
Sbjct: 354 PHYEIIVTKNGHLDQMTINIELA 376