Pairwise Alignments

Query, 426 a.a., Sigma-54 activated regulatory protein from Variovorax sp. SCN45

Subject, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 2e-27
 Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 11/253 (4%)

Query: 48  EAVIQSWLRCSRTHA-DRQRIVPFDAVTPSRLHATLARNRELLEVARQELAQMENMLAGT 106
           E V++SWLRC   H  D  +      V  +RL     ++ +L+ +AR  L  +   +AG 
Sbjct: 24  ETVVKSWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLIAIARSGLENLFRQVAGQ 83

Query: 107 DCRVILTDRDGVVVHVSDQPAAAHQPVLRKTAR-VGVNISERVVGTTAPGIVASTGQACT 165
           +  ++L+DR+GV V     P   +   LRK    +G   SE   GT A G    TG+A T
Sbjct: 84  NYVLLLSDREGVTVEFLGDPLFGNS--LRKAGLYLGSEWSEWRAGTCAVGACLETGEALT 141

Query: 166 VDGAEHYFDVLGHMQCAAAPIRDVTGRLAGVLDLTAEARRFGFDAASMVALYATA----- 220
           +   +H+ +    + C AAPI D+ G L+ VLD++  +      A+  +AL+  +     
Sbjct: 142 IHQTDHFDNTHTPLSCTAAPIYDIQGELSAVLDISLLSSPI-LKASQNLALHLVSATVRR 200

Query: 221 IENRLLQAQSSDHLILRFQASPTLLGTPLEALAGIAPDGTIAWLNNAGSRLLGRLPEAAD 280
           IE   L AQ+ +  +LRF  SP  L    EA   I   G IA + +AG+++L R     D
Sbjct: 201 IELANLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKILAR-STGLD 259

Query: 281 ERDVECLLGHDLA 293
            RD + L+G  ++
Sbjct: 260 WRDPQQLIGEPVS 272



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 10/53 (18%)

Query: 363 ADTDTGEAASPAGTLREHSRKLIEDTLAAHGGNVSQAARQLRVSRGTLYRRLR 415
           ADT  G  AS   +L          TL A   N+S+AAR+L + R T++R+++
Sbjct: 576 ADTVGGNEASATLSL----------TLTACNWNISEAARRLGLDRSTVHRQIK 618