Pairwise Alignments

Query, 265 a.a., D-xylose ABC transporter, ATP-binding protein XylG from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 9e-49
 Identities = 94/245 (38%), Positives = 149/245 (60%), Gaps = 1/245 (0%)

Query: 8   SRPLVELREIRKAFGGVKAVDGVSVNLYPGEVVALLGHNGAGKSTLMKMLAGAYPIDSGD 67
           ++ ++ L +I KAF GVKA+D  S+N+YPG V+AL+G NGAGKSTLMK+L G Y  D+G 
Sbjct: 2   TQAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGS 61

Query: 68  TLIAGQKVNIRTPAEAQAQGIETIYQTLALADNLDSVSNLFLGREKMTRWNTLDDHFMEV 127
               GQ V+ + P ++Q  GI  I+Q L L   L    N+FLGRE  + +  +    M  
Sbjct: 62  IEYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHR 121

Query: 128 QARKVFHRLNKNFTNIRVPVRRLSGGQRQVVAISRALYFNARILIMDEPCAALGPEETAM 187
           +A ++  RLN    + +  +  LS G++Q+V I++AL F ++++IMDEP  AL   ET  
Sbjct: 122 KADQLLARLNVKH-SAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETES 180

Query: 188 VGGLVKQLKADGVGIFLITHDMPDVFSLSDRVAVMKNGKLVGTYRTADVTEDEVLGMIIA 247
           +  ++ +L+  G GI  I+H + ++F + D + V+++GK +G  R  D  ED ++ M++ 
Sbjct: 181 LFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVG 240

Query: 248 GKRPE 252
            K  E
Sbjct: 241 RKLEE 245



 Score =  105 bits (261), Expect = 2e-27
 Identities = 75/242 (30%), Positives = 119/242 (49%), Gaps = 18/242 (7%)

Query: 27  VDGVSVNLYPGEVVALLGHNGAGKSTLMKMLAGAYPIDSGDTLIAGQKVNIRTPAEAQAQ 86
           V  VS  L  GE++ + G  GAG++ LMK++ GA P + G   + G+ VN  +P +  A 
Sbjct: 269 VHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLAN 328

Query: 87  GIETIYQTL---ALADNLDSVSNLFLGREKMTRWNTLDDHFMEVQARKVFHRLNKNFTNI 143
           GI  I +      L   L    N+ L             H  EV A   F RL     NI
Sbjct: 329 GIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRL----FNI 384

Query: 144 RVPVRR-----LSGGQRQVVAISRALYFNARILIMDEPCAALGPEETAMVGGLVKQLKAD 198
           + P R      LSGG +Q VAI++ L    ++LI+DEP   +       +  L+ Q KA+
Sbjct: 385 KTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444

Query: 199 GVGIFLITHDMPDVFSLSDRVAVMKNGKLVGTYRTADVTEDEVLGMIIAGKRPEGKEQAH 258
           G+ I L++ +MP+V  +SDR+ VM  G++ G +  ++  +++++   +      G+  AH
Sbjct: 445 GMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAV------GRNPAH 498

Query: 259 HA 260
            A
Sbjct: 499 AA 500