Pairwise Alignments

Query, 265 a.a., D-xylose ABC transporter, ATP-binding protein XylG from Variovorax sp. SCN45

Subject, 526 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  160 bits (404), Expect = 7e-44
 Identities = 98/255 (38%), Positives = 144/255 (56%), Gaps = 7/255 (2%)

Query: 6   DTSRPLVELREIRKAFGGVKAVDGVSVNLYPGEVVALLGHNGAGKSTLMKMLAGAYPIDS 65
           ++ RP++    I K+FGGV A+  V   L  GE+ AL+G NGAGKSTLMK+L+G Y    
Sbjct: 13  ESDRPILAAEAISKSFGGVAALKDVRFELRAGEIHALMGENGAGKSTLMKVLSGVYTDYE 72

Query: 66  GDTLIAGQKVNIRTPAEAQAQGIETIYQTLALADNLDSVSNLFLGREKMTRWNTLDDHFM 125
           G   + G+ V      +A+A GI  I+Q L L   L    N+FLGRE++     +D    
Sbjct: 73  GAVRVDGETVRFSNVRDAEAAGIAIIHQELNLVPELGVADNIFLGRERVIAGLFVDRKAS 132

Query: 126 EVQARKVFHRLNKNFTNIRVPVRRLSGGQRQVVAISRALYFNARILIMDEPCAALGPEET 185
              AR + +RL     +    V +L  G++Q+V I++AL   ARILIMDEP +AL P E 
Sbjct: 133 LEAARGLLNRLGIEL-DPEARVGQLRVGEQQLVEIAKALSVEARILIMDEPTSALSPGEC 191

Query: 186 AMVGGLVKQLKADGVGIFLITHDMPDVFSLSDRVAVMKNGKLVGTYRTADVTEDEVLGMI 245
             +  +++QL ADGVGI  I+H + +V  LSDRV V ++G+ V     A + E+ ++  +
Sbjct: 192 RRLFKIMRQLAADGVGIIYISHRIDEVMQLSDRVTVFRDGRHVWARPMAGLDENTIIAAM 251

Query: 246 I------AGKRPEGK 254
           +      A +R  GK
Sbjct: 252 VGRNLLDAHRRDRGK 266



 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 13/244 (5%)

Query: 10  PLVELREIRKAFGGVKA----VDGVSVNLYPGEVVALLGHNGAGKSTLMKML-AGAYPID 64
           P++ +R++  A  G       + GVS ++  GE++ + G  GAG++ +++ + A    + 
Sbjct: 271 PVLSVRDLSLAVSGRHGWRDVLKGVSFDVRAGEILGIGGLLGAGRTEILETIFASNEGLR 330

Query: 65  SGDTLIAGQKVNIRTPAEAQAQGIETIYQT-----LALADNL-DSVSNLFLGREKMTRWN 118
            G+  + G  VNIR+P +A+  G   + +      L L +++ D+V+   +GR  + R+ 
Sbjct: 331 GGEIRLDGIAVNIRSPRDARRLGFALVTEDRKAKGLHLHESIRDNVALPLVGR--LARFG 388

Query: 119 TLDDHFMEVQARKVFHRLNKNFTNIRVPVRRLSGGQRQVVAISRALYFNARILIMDEPCA 178
                     A+     L             LSGG +Q V I + L    R+L++DEP  
Sbjct: 389 LRSFEGERALAKGAVDALGVRCAGTGQAAGTLSGGNQQKVVIGKWLATGPRVLLLDEPTR 448

Query: 179 ALGPEETAMVGGLVKQLKADGVGIFLITHDMPDVFSLSDRVAVMKNGKLVGTYRTADVTE 238
            +       +  L+ +L  DG+ I +++ ++P++  L+DR+ VM  G+  G     + +E
Sbjct: 449 GIDVGAKREIYDLIFKLAGDGLAIVVVSSELPELLLLADRILVMAEGRQTGLISREEASE 508

Query: 239 DEVL 242
           + ++
Sbjct: 509 ERIM 512