Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 341 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

 Score =  114 bits (286), Expect = 3e-30
 Identities = 62/150 (41%), Positives = 96/150 (64%), Gaps = 1/150 (0%)

Query: 243 IPVLIWAVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTI 302
           +PV+I+ VVA++    +  T++G+Y +A+GGN  AA   GI VKR  ++++++  +L  +
Sbjct: 188 MPVIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLVIVYSIAGLLAGL 247

Query: 303 AAIVSIARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGML 362
           A +V+ AR   G   +G   EL  IAAAVIGGT+L+GG G I G+V+GALI+  + SG  
Sbjct: 248 AGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLSGGVGRITGTVIGALILGVMASGFT 307

Query: 363 LLDVPIGKRMVIIGQVLIVAVVFDVLYRRK 392
            + V    + +I G +++VAVV D  YR K
Sbjct: 308 FVGVDAYVQDIIKGLIIVVAVVID-QYRNK 336



 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 19/186 (10%)

Query: 12  TGIDLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARH 71
           T + + LVL+ + L      + V      L+ + L  +  Q +++G+++  +  +I+   
Sbjct: 23  TELSIFLVLIGIGLIFELFGWIVRDQSFLLNSQRLVLMILQVSIIGLLAIGVTQVIITTG 82

Query: 72  IDLSVGSVMGFVGVLIAYLQYTSGWS---WPTAC--------LAGLAVALLVSIYQGWLT 120
           IDLS GSV+    ++ A L  TS +S   +P+          + GL V LL     G + 
Sbjct: 83  IDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVVVGLGVGLLAGAINGSII 142

Query: 121 AVLGVPSFVVTLGGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGL 180
           A+ G+P F+ TLG ++S RG A    EG  QPV+      L   Y   IG  A  VI  L
Sbjct: 143 AITGIPPFIATLGMMVSARGLARFYTEG--QPVS-----MLSDSYT-AIGQGAMPVIIFL 194

Query: 181 VAAVLF 186
           V AV+F
Sbjct: 195 VVAVIF 200