Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 327 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  124 bits (311), Expect = 4e-33
 Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 74/363 (20%)

Query: 24  LLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARHIDLSVGSVMGFV 83
           LL V+ + F   S G+ LS EN+  V      + +V+  + L+++    DLSVGSV    
Sbjct: 19  LLFVLVLVFQAKSNGILLSFENMRGVMGLLPEMALVAIGVTLLMICGEFDLSVGSVFA-- 76

Query: 84  GVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSFVVTLGGLMSFRGAAF 143
                              L  +++A+L++          GVP  V  L GLM      F
Sbjct: 77  -------------------LMPMSMAVLLNS---------GVPFTVAVLLGLMICGAIGF 108

Query: 144 LVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGLVAAVLFARMFQKRAARARHEMPN 203
           +      Q     F   LG  +   I  + + VI+G    +L                P+
Sbjct: 109 INGYVTLQFSIPSFITTLGMLF---IARSLTIVISGGFPPLL---------------PPD 150

Query: 204 EPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPV--LIWAVVAIVLSFIVHR 261
            P WL                     Y        QG P  +  L + V+A +++ ++  
Sbjct: 151 LPTWL------------------FTDY------IWQGSPFRMSFLWFVVIAALVAALLSL 186

Query: 262 TRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVSIARLNAGTNSLGTG 321
           T FG ++ A GG  +AAA +GIPVKRV ++ F L +VL   A ++ + RL +   S+G G
Sbjct: 187 TNFGNWIRATGGFNEAAASMGIPVKRVKIVCFMLCSVLAGFAGLLQVLRLGSPLPSIGEG 246

Query: 322 MELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVPIGKRMVIIGQVLIV 381
           +EL  +AAAVIGGTALAGG G++FG+++G L+++++D+G++L  V        IG + + 
Sbjct: 247 LELQAVAAAVIGGTALAGGIGTVFGAIIGTLLIRTIDNGLVLSRVDANWFKFAIGVLTMF 306

Query: 382 AVV 384
           AV+
Sbjct: 307 AVI 309