Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (281), Expect = 1e-29
 Identities = 56/148 (37%), Positives = 97/148 (65%)

Query: 240 GIPIPVLIWAVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVL 299
           G+PI + + AV+ ++   ++ +T FGR  +  GGN +AA   GI V R+ +++F +  V+
Sbjct: 166 GLPIIIWVVAVLFVINQIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVM 225

Query: 300 VTIAAIVSIARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDS 359
             I+ ++  +RL +   + G   EL  IAAAV+GGT+LAGG G++ G+++GALI+  +++
Sbjct: 226 AAISGVLLSSRLFSAQTNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNN 285

Query: 360 GMLLLDVPIGKRMVIIGQVLIVAVVFDV 387
           GM +L VP   ++++ G V++VAV  DV
Sbjct: 286 GMNMLSVPYFYQLIVKGLVILVAVWLDV 313



 Score = 73.6 bits (179), Expect = 8e-18
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 13/185 (7%)

Query: 13  GIDLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIVARHI 72
           GI L LV++C++ +     F        ++  N  N+ QQ AVV I +  M  +I+   I
Sbjct: 20  GIFLSLVMLCIVFSFFNPRF--------MTVVNFMNILQQVAVVAIAAFGMTWVILLGEI 71

Query: 73  DLSVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSFVVTL 132
           DLSVGS++   G++ A   +  G  +  A    LA   L+ +  G LTA L +PSF+VT+
Sbjct: 72  DLSVGSIIAVAGMVGAQC-FAFGMGFAPAIALTLAAGALMGMLNGVLTAKLLLPSFIVTV 130

Query: 133 GGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGLVA---AVLFARM 189
             +  +RG   L   G    + +E +  +G     G+ +   WV+A L      VL    
Sbjct: 131 ATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPIII-WVVAVLFVINQIVLSKTS 189

Query: 190 FQKRA 194
           F +RA
Sbjct: 190 FGRRA 194