Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 404 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (494), Expect = 3e-54
 Identities = 130/403 (32%), Positives = 206/403 (51%), Gaps = 23/403 (5%)

Query: 2   SNPTPGWWRRTGIDLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVST 61
           + P+ G + R  I  R   + V L ++ + F  ++ GV   P N+ N+  Q + + I++ 
Sbjct: 10  TKPSIGDYLRNNI--REYGLLVALVIIMLFFQFVTNGVLFRPVNITNLVLQNSFIVIMAL 67

Query: 62  VMVLIIVARHIDLSVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTA 121
            M+LIIVA HIDLSVGS++ F+G + A +    G        A L V  ++   QG+  A
Sbjct: 68  GMLLIIVAGHIDLSVGSIVAFIGAISAIMLVKWGLPAFVVIPACLIVGGIMGAAQGYWVA 127

Query: 122 VLGVPSFVVTLGGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYDGGI------------ 169
              +PSF+VTL G++ FRG  ++V  G+      + FQ L  G+                
Sbjct: 128 YQKIPSFIVTLAGMLVFRGMTYVVLGGRPIGPFPKDFQILSTGFVPDFLYFLSPSPETIK 187

Query: 170 GVTASWVIAGLVAAVLFARMFQKRAARARHEMPNEPLWLELLLTAVPAAVVIGFAAVMNH 229
            + A   +  LV   +FA + + R    +H   NEP     +  AV + V +     ++ 
Sbjct: 188 NMVALVAVLLLVGYAIFAGV-RNRRINEQHGTENEPFVFFAIQMAVISLVALFLGFQLST 246

Query: 230 YKIDSKDAPQGIPIPVLIWAVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVT 289
           Y+        G+P  +++  V+  V +F+  R+  GR ++AMGGN  A  L GI  +R+T
Sbjct: 247 YR--------GLPNVLVVMGVLIAVYTFVTTRSTIGRRIYAMGGNEKATKLSGINTERLT 298

Query: 290 LMLFALLAVLVTIAAIVSIARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVL 349
              F  +  L  +A ++  ARLN+ T   G G EL VIAA  IGG + +GG G I G+V+
Sbjct: 299 FYAFVNMGALAALAGMIITARLNSATPKAGVGFELDVIAACFIGGASASGGVGKITGAVI 358

Query: 350 GALIMQSLDSGMLLLDVPIGKRMVIIGQVLIVAVVFDVLYRRK 392
           GA IM  +++GM ++ + I  + +I G VL+ AV FDV  + K
Sbjct: 359 GAFIMGVMNNGMSIMGIGIDYQQLIKGLVLLAAVFFDVYNKNK 401