Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 317 a.a., L-arabinose transporter permease from Sinorhizobium meliloti 1021

 Score =  126 bits (317), Expect = 8e-34
 Identities = 103/368 (27%), Positives = 175/368 (47%), Gaps = 81/368 (22%)

Query: 24  LLAVMAVAFSVMSGGV--FLSPENLYNVAQQTAVVGIVSTVMVLIIVARHIDLSVGSVMG 81
           LL + A AF V++  V  FL+  N+  + Q    +G+V+  M+  + +R  DLSVGS   
Sbjct: 15  LLVIFAAAFVVVALTVPNFLTERNMLGLLQSVVTIGVVACTMMFCLASRDFDLSVGS--- 71

Query: 82  FVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSFVVTLGGLMSFRGA 141
                             T   +G+ VA++ S   G  + VLG+ +  +  GG++     
Sbjct: 72  ------------------TVAFSGM-VAVMASNATG--SIVLGLLA-ALACGGIV----- 104

Query: 142 AFLVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGLV---AAVLFARMFQKRAARAR 198
                                 G   GI V A + I  L+   A +   R F   A+  R
Sbjct: 105 ----------------------GLANGI-VIARFRINALITTLATMQIVRGFALIASDGR 141

Query: 199 HEMPNEPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPVLIWAVVAIVLSFI 258
               N+P++ +L L+                           +P P+ + A+  IV  F+
Sbjct: 142 AVGINDPVFYQLSLSKFLT-----------------------VPTPIWVMALFFIVFGFL 178

Query: 259 VHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVSIARLNAGTNSL 318
           ++RT FG+   A+GGNP+A+ L G+ V R+ + +FAL  ++  +A ++  +R+ +G  + 
Sbjct: 179 LNRTVFGKNTLAIGGNPEASRLAGVDVARMRIWIFALQGLVCAVAGVLLASRITSGQPNA 238

Query: 319 GTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVPIGKRMVIIGQV 378
            TG+EL VI+A V+GG +LAGG  ++ G V+G LIM   ++ M LL++    + V+ G +
Sbjct: 239 ATGLELSVISACVLGGVSLAGGRATMTGVVVGVLIMGIAENVMNLLNIQAFYQYVVRGLI 298

Query: 379 LIVAVVFD 386
           L++AV+ D
Sbjct: 299 LLIAVLLD 306