Pairwise Alignments

Query, 396 a.a., D-xylose ABC transporter, permease protein XylH from Variovorax sp. SCN45

Subject, 330 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 2e-29
 Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 73/384 (19%)

Query: 9   WRRTGIDLRLVLMCVLLAVMAVAFSVMSGGVFLSPENLYNVAQQTAVVGIVSTVMVLIIV 68
           W+R G      L+ ++L+ ++V  S  S   FL+  N   +    +V GIV   M ++++
Sbjct: 17  WKRIGTMREAGLIAIILS-LSVIMSFASPH-FLTLGNFRAMLMSFSVEGIVVVGMTILLI 74

Query: 69  ARHIDLSVGSVMGFVGVLIAYLQYTSGWSWPTACLAGLAVALLVSIYQGWLTAVLGVPSF 128
              IDLSVGSV+ F  VL       SG             +L +     W  +++G+ + 
Sbjct: 75  VGGIDLSVGSVVCFSMVL-------SG-------------SLFLMGVDPWTASLVGIAAS 114

Query: 129 VVTLGGLMSFRGAAFLVAEGKTQPVNDEFFQRLGGGYDGGIGVTASWVIAGLVAAVLFAR 188
              +G +M F    F+   G    +                 + A  ++ GL   +    
Sbjct: 115 AA-IGCIMGF----FVTVVGLNHFITS---------------LAAMVIVRGLCLVIT--- 151

Query: 189 MFQKRAARARHEMPNEPLWLELLLTAVPAAVVIGFAAVMNHYKIDSKDAPQGIPIPVLIW 248
                           PL    L T  PA   +G                 G+P  +LI+
Sbjct: 152 -------------KGTPL---SLFTLPPAFKAVGQGTFF------------GVPYVILIF 183

Query: 249 AVVAIVLSFIVHRTRFGRYVFAMGGNPDAAALVGIPVKRVTLMLFALLAVLVTIAAIVSI 308
             V     F++ R    R VF  G N  AA   GI  K V   +  L A L  +A  + +
Sbjct: 184 IAVVGAFDFLLRRATAFRKVFYTGSNEKAALYSGIKTKDVKFWVTVLCATLSGVAGTIYM 243

Query: 309 ARLNAGTNSLGTGMELYVIAAAVIGGTALAGGSGSIFGSVLGALIMQSLDSGMLLLDVPI 368
           +R  A T + G GMEL +IAAAVIGG +L GGSG+I G++LG  ++  + S ++LLDV +
Sbjct: 244 SRFGAATPTFGVGMELNIIAAAVIGGASLNGGSGTILGAILGIALLSVVTSSLILLDVSV 303

Query: 369 GKRMVIIGQVLIVAVVFDVLYRRK 392
             + +I G +L+ AV  D L  ++
Sbjct: 304 YWQDMIKGCILLAAVSIDHLLNKR 327